RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 PRR33A8MZF0 331 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 TEX28O15482 410 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 SLC26A4O43511 780 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 TADA2AO75478 443 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 ADH1AP07327 375 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 PLS3P13797 630 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 SYT1P21579 422 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 SP100P23497 879 aaPredicted RBP13.45□□□□□ -0.26
SSR1-205ENST00000475213 UBA7P41226 1012 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 MTHFRP42898 656 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 USP41Q3LFD5 358 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 ARSHQ5FYA8 562 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 KIAA1841Q6NSI8 718 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 APBB1IPQ7Z5R6 666 aaPredicted RBP13.45□□□□□ -0.26
SSR1-205ENST00000475213 CEP120Q8N960 986 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 FEZF2Q8TBJ5 459 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 LRRC15Q8TF66 581 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 SPIRE2Q8WWL2 714 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 CALML4Q96GE6 196 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 RIPOR3Q96MK2 946 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 NTPCRQ9BSD7 190 aaKnown RBP13.45□□□□□ -0.26
SSR1-205ENST00000475213 TARS2Q9BW92 718 aaKnown RBP13.45□□□□□ -0.26
SSR1-205ENST00000475213 CDT1Q9H211 546 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 RXFP1Q9HBX9 757 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 CLIC4Q9Y696 253 aa13.45□□□□□ -0.26
SSR1-205ENST00000475213 PDCD11Q14690 1871 aaKnown RBP13.44□□□□□ -0.26
SSR1-205ENST00000475213 KIF4AO95239 1232 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 PROZP22891 400 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 LONP1P36776 959 aaKnown RBP13.44□□□□□ -0.26
SSR1-205ENST00000475213 ZNF568Q3ZCX4 644 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 GLRA4Q5JXX5 417 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 ATAT1Q5SQI0 421 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 TMC5Q6UXY8 1006 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 ZBTB33Q86T24 672 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 GPR65Q8IYL9 337 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 TMEM161BQ8NDZ6 487 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 HASPINQ8TF76 798 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 EDAQ92838 391 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 INTS4Q96HW7 963 aaKnown RBP13.44□□□□□ -0.26
SSR1-205ENST00000475213 PPP1R10Q96QC0 940 aaKnown RBP13.44□□□□□ -0.26
SSR1-205ENST00000475213 SFXN1Q9H9B4 322 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 TSHZ2Q9NRE2 1034 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 BLOC1S4Q9NUP1 217 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 KCNG1Q9UIX4 513 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 NR2E1Q9Y466 385 aa13.44□□□□□ -0.26
SSR1-205ENST00000475213 SF3B1O75533 1304 aaKnown RBP eCLIP13.43□□□□□ -0.26
SSR1-205ENST00000475213 C2CD4DB7Z1M9 353 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 K7ELQ4 463 aaPredicted RBP13.43□□□□□ -0.26
SSR1-205ENST00000475213 ABLIM1O14639 778 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 GLUD1P00367 558 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 MAPTP10636 758 aaKnown RBP13.43□□□□□ -0.26
SSR1-205ENST00000475213 PLCG1P19174 1290 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 GRM5P41594 1212 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 SMTNP53814 917 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 OSTNP61366 133 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 RESTQ13127 1097 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 KARSQ15046 597 aaKnown RBP13.43□□□□□ -0.26
SSR1-205ENST00000475213 PTPAQ15257 358 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 MPZL3Q6UWV2 235 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 ALKAL1Q6UXT8 129 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 GPR149Q86SP6 731 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 RIN2Q8WYP3 895 aaPredicted RBP13.43□□□□□ -0.26
SSR1-205ENST00000475213 DOCK6Q96HP0 2047 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 ZBTB45Q96K62 511 aaPredicted RBP13.43□□□□□ -0.26
SSR1-205ENST00000475213 CCDC94Q9BW85 323 aaPredicted RBP13.43□□□□□ -0.26
SSR1-205ENST00000475213 MAN1C1Q9NR34 630 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.43□□□□□ -0.26
SSR1-205ENST00000475213 FNIP2Q9P278 1114 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 MYH15Q9Y2K3 1946 aa13.43□□□□□ -0.26
SSR1-205ENST00000475213 SMIM28A0A1B0GU29 152 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 STK25O00506 426 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 BRD1O95696 1058 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 MCF2P10911 925 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 RPL17P18621 184 aaKnown RBP13.42□□□□□ -0.26
SSR1-205ENST00000475213 MARCKSP29966 332 aaPredicted RBP13.42□□□□□ -0.26
SSR1-205ENST00000475213 YARSP54577 528 aaKnown RBP13.42□□□□□ -0.26
SSR1-205ENST00000475213 ZXDAP98168 799 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 STRN3Q13033 797 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 DHX8Q14562 1220 aaKnown RBP13.42□□□□□ -0.26
SSR1-205ENST00000475213 MCM6Q14566 821 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 XKR4Q5GH76 650 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 RTP2Q5QGT7 225 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 FAM171A1Q5VUB5 890 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 FAM173BQ6P4H8 233 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 PRSS55Q6UWB4 352 aaPredicted RBP13.42□□□□□ -0.26
SSR1-205ENST00000475213 GPBP1Q86WP2 473 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 PALB2Q86YC2 1186 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 GLYCTKQ8IVS8 523 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 RASSF8Q8NHQ8 419 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 RAD54LQ92698 747 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 REEP2Q9BRK0 252 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 TCHPQ9BT92 498 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 TTPALQ9BTX7 342 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 TMEM121BQ9BXQ6 578 aaPredicted RBP13.42□□□□□ -0.26
SSR1-205ENST00000475213 CCSER1Q9C0I3 900 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 TOPORSQ9NS56 1045 aaPredicted RBP13.42□□□□□ -0.26
SSR1-205ENST00000475213 LARSQ9P2J5 1176 aaKnown RBP13.42□□□□□ -0.26
SSR1-205ENST00000475213 ODF2LQ9ULJ1 636 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 HCN4Q9Y3Q4 1203 aa13.42□□□□□ -0.26
SSR1-205ENST00000475213 ZNF318Q5VUA4 2279 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms