RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PPP1R9AQ9ULJ8 1098 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 PCDHGB4Q9UN71 923 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 PCDHGB5Q9Y5G0 923 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 MROH5Q6ZUA9 1318 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 IPO5O00410 1097 aaKnown RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 B4GALT4O60513 344 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 LRRN2O75325 713 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 UPP2O95045 317 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 CYP1A2P05177 515 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 PON1P27169 355 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 PEX3P56589 373 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 USP46P62068 366 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 TIMM10P62072 90 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 TXNL4AP83876 142 aaKnown RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 MYBPC1Q00872 1141 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 CCNIQ14094 377 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 CLUL1Q15846 466 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 CCDC14Q49A88 953 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 CCDC84Q86UT8 332 aaPredicted RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 ZNF410Q86VK4 478 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 SFR1Q86XK3 245 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 CHERPQ8IWX8 916 aaKnown RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 EPS8L3Q8TE67 593 aaKnown RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 SCG3Q8WXD2 468 aaKnown RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 YIPF3Q9GZM5 350 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 KLC2Q9H0B6 622 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 PPANQ9NQ55 473 aaKnown RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 ARHGAP28Q9P2N2 729 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 STK17AQ9UEE5 414 aa4.4□□□□□ -1.71
USP16-205ENST00000474835 NOCTQ9UK39 431 aaKnown RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 KIF26AQ9ULI4 1882 aaPredicted RBP4.4□□□□□ -1.71
USP16-205ENST00000474835 SMCHD1A6NHR9 2005 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 ASTN1O14525 1302 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 BICDL2A1A5D9 508 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 ALOX15BO15296 676 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 TMCC1O94876 653 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 PLEKHA8P1O95397 391 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 RPSAP08865 295 aaKnown RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 FCER1AP12319 257 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 AOC1P19801 751 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 STIP1P31948 543 aaKnown RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 CXCR5P32302 372 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 HOXD12P35452 270 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 FOSBP53539 338 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 SLC12A3P55017 1021 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 ATP6V0D1P61421 351 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 SLC29A2Q14542 456 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 GRM4Q14833 912 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 EAPPQ56P03 285 aaPredicted RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 EFHC2Q5JST6 749 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 TMEM154Q6P9G4 183 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 BICDL1Q6ZP65 573 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 RINLQ6ZS11 566 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 EEPD1Q7L9B9 569 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 TMC4Q7Z404 712 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 AHI1Q8N157 1196 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 SAMD3Q8N6K7 520 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 GLIS3Q8NEA6 775 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 FBXO25Q8TCJ0 367 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 ECSITQ9BQ95 431 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 PALMDQ9NP74 551 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 SCUBE2Q9NQ36 999 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 ETNK2Q9NVF9 386 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 RIMS3Q9UJD0 308 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 HAO1Q9UJM8 370 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 SNX9Q9Y5X1 595 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 COL2A1P02458 1487 aaPredicted RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 TMEM110-MUSTN1A8MSY1 372 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 FOXO6A8MYZ6 492 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 B4E1Z4 1266 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 SLC16A3O15427 465 aaKnown RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 ATP9AO75110 1047 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 CLASP2O75122 1294 aaKnown RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 SSBP05455 408 aaKnown RBP eCLIP4.39□□□□□ -1.71
USP16-205ENST00000474835 TSHRP16473 764 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 CDH2P19022 906 aaPredicted RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 TNNC1P63316 161 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 ARHGAP4P98171 946 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 RNASELQ05823 741 aaKnown RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 NEXNQ0ZGT2 675 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 EFTUD2Q15029 972 aaKnown RBP eCLIP4.39□□□□□ -1.71
USP16-205ENST00000474835 BARGINQ6ZT62 677 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 SYDE1Q6ZW31 735 aaPredicted RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 COPS6Q7L5N1 327 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 TBC1D1Q86TI0 1168 aaPredicted RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 ZNF554Q86TJ5 538 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 TMEM110Q86TL2 294 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 MORC4Q8TE76 937 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 TEKT1Q969V4 418 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 PRR11Q96HE9 360 aaPredicted RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 BTN2A3PQ96KV6 586 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 BTBD10Q9BSF8 475 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 SLC13A1Q9BZW2 595 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 UBA5Q9GZZ9 404 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 CLK4Q9HAZ1 481 aaKnown RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 PNPLA8Q9NP80 782 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 TXLNGQ9NUQ3 528 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 TAS2R1Q9NYW7 299 aa4.39□□□□□ -1.71
USP16-205ENST00000474835 CPSF2Q9P2I0 782 aaKnown RBP4.39□□□□□ -1.71
USP16-205ENST00000474835 AUP1Q9Y679 476 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms