RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 RPL17P18621 184 aaKnown RBP17.34■□□□□ 0.37
CDPF1-205ENST00000474256 GRM5P41594 1212 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 CUL4AQ13619 759 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 XKR4Q5GH76 650 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 FAM171A1Q5VUB5 890 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 PRSS55Q6UWB4 352 aaPredicted RBP17.34■□□□□ 0.37
CDPF1-205ENST00000474256 ALKAL1Q6UXT8 129 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 OTOP3Q7RTS5 596 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 FBXL6Q8N531 539 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 CEP120Q8N960 986 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 LNX1Q8TBB1 728 aaPredicted RBP17.34■□□□□ 0.37
CDPF1-205ENST00000474256 PIK3R5Q8WYR1 880 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 ACSF2Q96CM8 615 aaPredicted RBP17.34■□□□□ 0.37
CDPF1-205ENST00000474256 AK8Q96MA6 479 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 PLIN2Q99541 437 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 TTPALQ9BTX7 342 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 TARS2Q9BW92 718 aaKnown RBP17.34■□□□□ 0.37
CDPF1-205ENST00000474256 CDT1Q9H211 546 aa17.34■□□□□ 0.37
CDPF1-205ENST00000474256 SLC16A4O15374 487 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 SLC26A4O43511 780 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 ASGR2P07307 311 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 PLA2G4BP0C869 781 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 SPATA31D3P0C874 917 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 PLS3P13797 630 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 HOXD11P31277 338 aaPredicted RBP17.33■□□□□ 0.36
CDPF1-205ENST00000474256 RAD51AP2Q09MP3 1159 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 ELAVL2Q12926 359 aaKnown RBP17.33■□□□□ 0.36
CDPF1-205ENST00000474256 ZNF568Q3ZCX4 644 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 GLRA4Q5JXX5 417 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 SPATA31D4Q6ZUB0 917 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 BRAPQ7Z569 592 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 SUGP1Q8IWZ8 645 aaKnown RBP17.33■□□□□ 0.36
CDPF1-205ENST00000474256 TMEM161BQ8NDZ6 487 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 ZNF707Q96C28 371 aaPredicted RBP17.33■□□□□ 0.36
CDPF1-205ENST00000474256 CLSTN3Q9BQT9 956 aa17.33■□□□□ 0.36
CDPF1-205ENST00000474256 WDR6Q9NNW5 1121 aaKnown RBP17.33■□□□□ 0.36
CDPF1-205ENST00000474256 TOPORSQ9NS56 1045 aaPredicted RBP17.33■□□□□ 0.36
CDPF1-205ENST00000474256 TDRD15B5MCY1 1934 aaKnown RBP17.33■□□□□ 0.36
CDPF1-205ENST00000474256 MUC6Q6W4X9 2439 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 SMIM28A0A1B0GU29 152 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 BMP15O95972 392 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 MYBP10242 640 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 MCF2P10911 925 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 IGFBP6P24592 240 aaPredicted RBP17.32■□□□□ 0.36
CDPF1-205ENST00000474256 CLCNKBP51801 687 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 YARSP54577 528 aaKnown RBP17.32■□□□□ 0.36
CDPF1-205ENST00000474256 UPP1Q16831 310 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 ARSHQ5FYA8 562 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 DCLRE1AQ6PJP8 1040 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 CD300LGQ6UXG3 332 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 CEP57Q86XR8 500 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 GLYCTKQ8IVS8 523 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 CDK5RAP3Q96JB5 506 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 UROC1Q96N76 676 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 CCDC94Q9BW85 323 aaPredicted RBP17.32■□□□□ 0.36
CDPF1-205ENST00000474256 ZDHHC7Q9NXF8 308 aa17.32■□□□□ 0.36
CDPF1-205ENST00000474256 N4BP1O75113 896 aaKnown RBP17.31■□□□□ 0.36
CDPF1-205ENST00000474256 B3GAT3O94766 335 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 MAPTP10636 758 aaKnown RBP17.31■□□□□ 0.36
CDPF1-205ENST00000474256 SMTNP53814 917 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 OSTNP61366 133 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 PSMD5Q16401 504 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 IER5LQ5T953 404 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 PDXDC1Q6P996 788 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 MPZL3Q6UWV2 235 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.31■□□□□ 0.36
CDPF1-205ENST00000474256 LRRC15Q8TF66 581 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 SMG7Q92540 1137 aaKnown RBP17.31■□□□□ 0.36
CDPF1-205ENST00000474256 KCNN1Q92952 543 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 SNX27Q96L92 541 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 ZMAT2Q96NC0 199 aaKnown RBP17.31■□□□□ 0.36
CDPF1-205ENST00000474256 TCHPQ9BT92 498 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 PRKD2Q9BZL6 878 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 SMOC2Q9H3U7 446 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 GOLGA2P5Q9HBQ8 144 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 ZNF318Q5VUA4 2279 aa17.31■□□□□ 0.36
CDPF1-205ENST00000474256 CLUHO75153 1309 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 NPHP3-ACAD11A0A0J9YXS1 232 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 MEFVO15553 781 aaPredicted RBP17.3■□□□□ 0.36
CDPF1-205ENST00000474256 TOM1L1O75674 476 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 ZMYND10O75800 440 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 PDGFBP01127 241 aaPredicted RBP17.3■□□□□ 0.36
CDPF1-205ENST00000474256 KCNE1P15382 129 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 FGFR3P22607 806 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 UBA7P41226 1012 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 SOX4Q06945 474 aaPredicted RBP17.3■□□□□ 0.36
CDPF1-205ENST00000474256 STRN3Q13033 797 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 SF3A1Q15459 793 aaKnown RBP17.3■□□□□ 0.36
CDPF1-205ENST00000474256 STAMQ92783 540 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 ZBTB45Q96K62 511 aaPredicted RBP17.3■□□□□ 0.36
CDPF1-205ENST00000474256 ACAP3Q96P50 834 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 SLC38A7Q9NVC3 462 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 CNTN3Q9P232 1028 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 LARSQ9P2J5 1176 aaKnown RBP17.3■□□□□ 0.36
CDPF1-205ENST00000474256 FBXW11Q9UKB1 542 aa17.3■□□□□ 0.36
CDPF1-205ENST00000474256 ADAM12O43184 909 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 AVPR2P30518 371 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 LONP1P36776 959 aaKnown RBP17.29■□□□□ 0.36
CDPF1-205ENST00000474256 NCKAP1LP55160 1127 aa17.29■□□□□ 0.36
CDPF1-205ENST00000474256 NHLH1Q02575 133 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms