RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 K7ENM7 598 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 TEX28O15482 410 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 TADA2AO75478 443 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 BRD1O95696 1058 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 KRT18P05783 430 aaKnown RBP19.65■□□□□ 0.74
UPF3A-203ENST00000474056 DDIT3P35638 169 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 NASPP49321 788 aaPredicted RBP19.65■□□□□ 0.74
UPF3A-203ENST00000474056 NOLC1Q14978 699 aaKnown RBP eCLIP19.65■□□□□ 0.74
UPF3A-203ENST00000474056 USP41Q3LFD5 358 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 FOXD4L5Q5VV16 416 aaPredicted RBP19.65■□□□□ 0.74
UPF3A-203ENST00000474056 HAUS6Q7Z4H7 955 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 MYCT1Q8N699 235 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 FOXD4L4Q8WXT5 416 aaPredicted RBP19.65■□□□□ 0.74
UPF3A-203ENST00000474056 C1QTNF1Q9BXJ1 281 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 PARVGQ9HBI0 331 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 GOLGA2P5Q9HBQ8 144 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 ANKFY1Q9P2R3 1169 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 CCDC39Q9UFE4 941 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 SSX2IPQ9Y2D8 614 aa19.65■□□□□ 0.74
UPF3A-203ENST00000474056 H0YCG3 227 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 TOM1L1O75674 476 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 HSP90AA1P07900 732 aaKnown RBP19.64■□□□□ 0.73
UPF3A-203ENST00000474056 WEE2P0C1S8 567 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 YARSP54577 528 aaKnown RBP19.64■□□□□ 0.73
UPF3A-203ENST00000474056 ITIH3Q06033 890 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 STK38Q15208 465 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 SEZ6Q53EL9 994 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 XKR4Q5GH76 650 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 KIAA1841Q6NSI8 718 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 ALKAL1Q6UXT8 129 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 KRI1Q8N9T8 703 aaKnown RBP19.64■□□□□ 0.73
UPF3A-203ENST00000474056 KCNN1Q92952 543 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 RPGRIP1Q96KN7 1286 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 SNX27Q96L92 541 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 FIZ1Q96SL8 496 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 HAPLN2Q9GZV7 340 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 ADAM7Q9H2U9 754 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 ZHX3Q9H4I2 956 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 POMKQ9H5K3 350 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 RXFP1Q9HBX9 757 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 C11orf16Q9NQ32 467 aa19.64■□□□□ 0.73
UPF3A-203ENST00000474056 SF3B1O75533 1304 aaKnown RBP eCLIP19.64■□□□□ 0.73
UPF3A-203ENST00000474056 SMIM28A0A1B0GU29 152 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 MEFVO15553 781 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-203ENST00000474056 TRAK2O60296 914 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 ADH1AP07327 375 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 SP100P23497 879 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-203ENST00000474056 IGFBP6P24592 240 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-203ENST00000474056 TXLNAP40222 546 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 SOX4Q06945 474 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-203ENST00000474056 RTP2Q5QGT7 225 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 RRAGBQ5VZM2 374 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 CES5AQ6NT32 575 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 ZPBP2Q6X784 338 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 RNF135Q8IUD6 432 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 GLYCTKQ8IVS8 523 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 SPRYD3Q8NCJ5 442 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 LINC00301Q8NCQ3 95 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 RIN2Q8WYP3 895 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-203ENST00000474056 BICD1Q96G01 975 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 FBXL18Q96ME1 805 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 ZMAT2Q96NC0 199 aaKnown RBP19.63■□□□□ 0.73
UPF3A-203ENST00000474056 ACAP3Q96P50 834 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 TOPORSQ9NS56 1045 aaPredicted RBP19.63■□□□□ 0.73
UPF3A-203ENST00000474056 STK17AQ9UEE5 414 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 MUTYHQ9UIF7 546 aa19.63■□□□□ 0.73
UPF3A-203ENST00000474056 TECTAO75443 2155 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 A0A087X0B3 334 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 FAM86C2PA6NEL3 165 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 DCXO43602 365 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 TBCAO75347 108 aaKnown RBP19.62■□□□□ 0.73
UPF3A-203ENST00000474056 RPL17P18621 184 aaKnown RBP19.62■□□□□ 0.73
UPF3A-203ENST00000474056 NMT1P30419 496 aaKnown RBP19.62■□□□□ 0.73
UPF3A-203ENST00000474056 CLCNKBP51801 687 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 MCL1Q07820 350 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 PRSS55Q6UWB4 352 aaPredicted RBP19.62■□□□□ 0.73
UPF3A-203ENST00000474056 TMC5Q6UXY8 1006 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 DYMQ7RTS9 669 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 SFXN1Q9H9B4 322 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 MAN1C1Q9NR34 630 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 TFIP11Q9UBB9 837 aaKnown RBP19.62■□□□□ 0.73
UPF3A-203ENST00000474056 TBX20Q9UMR3 447 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 TCHHQ07283 1943 aa19.62■□□□□ 0.73
UPF3A-203ENST00000474056 SPDYE4A6NLX3 237 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 TMEM189-UBE2V1I3L0A0 370 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 CLDN3O15551 220 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 F13A1P00488 732 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 ALADP13716 330 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 MATR3P43243 847 aaKnown RBP eCLIP19.61■□□□□ 0.73
UPF3A-203ENST00000474056 PKP1Q13835 747 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 FAM171A1Q5VUB5 890 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 CD300LGQ6UXG3 332 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 GPR65Q8IYL9 337 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 C3orf58Q8NDZ4 430 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 ZNF396Q96N95 335 aaPredicted RBP19.61■□□□□ 0.73
UPF3A-203ENST00000474056 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.61■□□□□ 0.73
UPF3A-203ENST00000474056 CNTN3Q9P232 1028 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 FNIP2Q9P278 1114 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 DOCK8Q8NF50 2099 aa19.61■□□□□ 0.73
UPF3A-203ENST00000474056 MYMKA6NI61 221 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms