RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 TYRP14679 529 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 IL2RBP14784 551 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 SERPINB3P29508 390 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 TRAPPC10P48553 1259 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 KCNQ1P51787 676 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 ANTXR2P58335 489 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 NKX6-1P78426 367 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-212ENST00000473961 FOXO4P98177 505 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 SEPT2Q15019 361 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 UBE3CQ15386 1083 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 DGKKQ5KSL6 1271 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 SAPCD2Q86UD0 394 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 CPXCR1Q8N123 301 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 CCHCR1Q8TD31 782 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 PNISRQ8TF01 805 aaKnown RBP5.17□□□□□ -1.58
BRCA1-212ENST00000473961 CASKIN2Q8WXE0 1202 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 HOXB13Q92826 284 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-212ENST00000473961 RIPOR3Q96MK2 946 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 C22orf23Q9BZE7 217 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 ARMT1Q9H993 441 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 CERS4Q9HA82 394 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 PTPRHQ9HD43 1115 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 MOCS1Q9NZB8 636 aa5.17□□□□□ -1.58
BRCA1-212ENST00000473961 MYBBP1AQ9BQG0 1328 aaKnown RBP5.17□□□□□ -1.58
BRCA1-212ENST00000473961 CCDC189A1A4V9 331 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 SH3BP5O60239 455 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 ALDH1A2O94788 518 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 HNRNPLP14866 589 aaKnown RBP eCLIP5.16□□□□□ -1.58
BRCA1-212ENST00000473961 BRAFP15056 766 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 ATF2P15336 505 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 SLC7A1P30825 629 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 PRIM2P49643 509 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 CDR1P51861 262 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 DLG4P78352 724 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 CREMQ03060 361 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 TNFAIP2Q03169 654 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 DUSP2Q05923 314 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 TOP3AQ13472 1001 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-212ENST00000473961 PLS1Q14651 629 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 TMEM95Q3KNT9 176 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 ZNF568Q3ZCX4 644 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 KHDC1Q4VXA5 237 aaKnown RBP5.16□□□□□ -1.58
BRCA1-212ENST00000473961 SLC44A4Q53GD3 710 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 PHF19Q5T6S3 580 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 ERICH6BQ5W0A0 696 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 ERAP2Q6P179 960 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 APOA5Q6Q788 366 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 PLA2G15Q8NCC3 412 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 MYRIPQ8NFW9 859 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 OR2I1PQ8NGU4 316 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 SLC7A6OSQ96CW6 309 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-212ENST00000473961 LTV1Q96GA3 475 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-212ENST00000473961 CDC5LQ99459 802 aaKnown RBP5.16□□□□□ -1.58
BRCA1-212ENST00000473961 MCOLN1Q9GZU1 580 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 CNTD2Q9H8S5 307 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 TLR9Q9NR96 1032 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 MBD1Q9UIS9 605 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-212ENST00000473961 MAGEL2Q9UJ55 1249 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 CDC42EP3Q9UKI2 254 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 FAM184BQ9ULE4 1060 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 PLA2G2DQ9UNK4 145 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 CORO2BQ9UQ03 480 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 MYRFQ9Y2G1 1151 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 PCDHA3Q9Y5H8 950 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 PMF1-BGLAPU3KQ54 211 aa5.16□□□□□ -1.58
BRCA1-212ENST00000473961 MTSS1O43312 755 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 IL18RAPO95256 599 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 GNAI3P08754 354 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 DDCP20711 480 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 MALP21145 153 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 TNFSF4P23510 183 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 IGFBP6P24592 240 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-212ENST00000473961 PIK3CBP42338 1070 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 KIR2DL3P43628 341 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 CCT5P48643 541 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 STAT5BP51692 787 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 CASP5P51878 434 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 NCKAP1LP55160 1127 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 GNAI1P63096 354 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 POU5F1BQ06416 359 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 ZMAT1Q5H9K5 638 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 KHDC1LQ5JSQ8 128 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 IZUMO3Q5VZ72 239 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 KRT40Q6A162 431 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 SWSAP1Q6NVH7 229 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 ABHD15Q6UXT9 468 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 APBB1IPQ7Z5R6 666 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-212ENST00000473961 CLEC14AQ86T13 490 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 STK32CQ86UX6 486 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 BCL6BQ8N143 479 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-212ENST00000473961 SH2D3CQ8N5H7 860 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 PAF1Q8N7H5 531 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 SPATA5Q8NB90 893 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 POF1BQ8WVV4 589 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 CCT6BQ92526 530 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 ANKS1AQ92625 1134 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 MRGPRX4Q96LA9 322 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 VRK1Q99986 396 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-212ENST00000473961 COLEC11Q9BWP8 271 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 CARD11Q9BXL7 1154 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms