RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SF3B1O75533 1304 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRAF4-209ENST00000473421 CPLX1O14810 134 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 TBX3O15119 743 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 DKC1O60832 514 aaKnown RBP eCLIP13.99□□□□□ -0.17
TRAF4-209ENST00000473421 NR1I2O75469 434 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 PSMA5P28066 241 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 OR1D2P34982 312 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 RARRES1P49788 294 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 POU5F1BQ06416 359 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 PPM1LQ5SGD2 360 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 AXDND1Q5T1B0 1012 aaPredicted RBP13.99□□□□□ -0.17
TRAF4-209ENST00000473421 EEF1DP3Q658K8 133 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 GALNT17Q6IS24 598 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 NOSTRINQ8IVI9 506 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 EXOC8Q8IYI6 725 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 ZBTB44Q8NCP5 570 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 NELL1Q92832 810 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 TNFRSF25Q93038 417 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 MCRS1Q96EZ8 462 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 PDZD7Q9H5P4 517 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 POLD4Q9HCU8 107 aa13.99□□□□□ -0.17
TRAF4-209ENST00000473421 DCDC2BA2VCK2 349 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 I3L4J1 428 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 LAMTOR5O43504 91 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 USO1O60763 962 aaKnown RBP13.98□□□□□ -0.17
TRAF4-209ENST00000473421 LYPLA2O95372 231 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 HNRNPA1P09651 372 aaKnown RBP eCLIP13.98□□□□□ -0.17
TRAF4-209ENST00000473421 GCFC2P16383 781 aaKnown RBP13.98□□□□□ -0.17
TRAF4-209ENST00000473421 HOXC13P31276 330 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 TFDP1Q14186 410 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 ZNF528Q3MIS6 628 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 TANGO2Q6ICL3 276 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 TPRG1Q6ZUI0 275 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 ZNF687Q8N1G0 1237 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 C3orf58Q8NDZ4 430 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 CLDN23Q96B33 292 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 SHDQ96IW2 340 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 NFKBIZQ9BYH8 718 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 BCO2Q9BYV7 579 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 HEBP1Q9NRV9 189 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 NCDNQ9UBB6 729 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 FBXO4Q9UKT5 387 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 ZFP37Q9Y6Q3 630 aaPredicted RBP13.98□□□□□ -0.17
TRAF4-209ENST00000473421 TRIP11Q15643 1979 aa13.98□□□□□ -0.17
TRAF4-209ENST00000473421 ZFHX4Q86UP3 3567 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 ACACBO00763 2458 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 LRRIQ4A6NIV6 560 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 MARCH6O60337 910 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 LILRB5O75023 590 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 RECQL4O94761 1208 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 SPATA31C1P0DKV0 1188 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 FDPSP14324 419 aaKnown RBP13.97□□□□□ -0.17
TRAF4-209ENST00000473421 PRKCQQ04759 706 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 NCBP1Q09161 790 aaKnown RBP13.97□□□□□ -0.17
TRAF4-209ENST00000473421 MTAPQ13126 283 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 RAB33AQ14088 237 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 PCBP1Q15365 356 aaKnown RBP eCLIP13.97□□□□□ -0.176e-7■■■□□ 15.8
TRAF4-209ENST00000473421 LPAL2Q16609 132 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 GLRA4Q5JXX5 417 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 LIN9Q5TKA1 542 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 CENPQQ7L2Z9 268 aaPredicted RBP13.97□□□□□ -0.17
TRAF4-209ENST00000473421 TCEAL4Q96EI5 215 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 FZD8Q9H461 694 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 GOLGA2P5Q9HBQ8 144 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 ANKEF1Q9NU02 776 aa13.97□□□□□ -0.17
TRAF4-209ENST00000473421 SMG5Q9UPR3 1016 aaKnown RBP13.97□□□□□ -0.17
TRAF4-209ENST00000473421 NCANO14594 1321 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 CFAP47Q6ZTR5 3102 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 DGAT1O75907 488 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 TDGF1P13385 188 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 CEBPBP17676 345 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 FGFR3P22607 806 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 FCARP24071 287 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 TKTP29401 623 aaKnown RBP13.96□□□□□ -0.17
TRAF4-209ENST00000473421 HOXA9P31269 272 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 BRCC3P46736 316 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 GRM2Q14416 872 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 PABPC1LQ4VXU2 614 aaKnown RBP13.96□□□□□ -0.17
TRAF4-209ENST00000473421 PPP4R3CPQ6ZMV5 832 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 MTSS1LQ765P7 747 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 TMEM130Q8N3G9 435 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 KIFC3Q9BVG8 833 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 EPC1Q9H2F5 836 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 TMEM60Q9H2L4 133 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 ZSCAN32Q9NX65 697 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 TPCN1Q9ULQ1 816 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 GDAQ9Y2T3 454 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 PCDHGA2Q9Y5H1 932 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 CYP46A1Q9Y6A2 500 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 CDY1Q9Y6F8 540 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 F5P12259 2224 aa13.96□□□□□ -0.17
TRAF4-209ENST00000473421 THP07101 528 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 RHOP08100 348 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 LIG1P18858 919 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 CCR2P41597 374 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 TXKP42681 527 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 CLCNKBP51801 687 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 CREMQ03060 361 aa13.95□□□□□ -0.18
TRAF4-209ENST00000473421 SOX4Q06945 474 aaPredicted RBP13.95□□□□□ -0.18
TRAF4-209ENST00000473421 ZBTB41Q5SVQ8 909 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms