RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 WDR11Q9BZH6 1224 aa15.21■□□□□ 0.03
NHLRC3-204ENST00000473371 NINJ2Q9NZG7 142 aa15.21■□□□□ 0.03
NHLRC3-204ENST00000473371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 RBM5P52756 815 aaKnown RBP eCLIP15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 MFAP3P55082 362 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 STRN3Q13033 797 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 PTK6Q13882 451 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 PADI6Q6TGC4 694 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 ASRGL1Q7L266 308 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 SP8Q8IXZ3 490 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 ZSWIM2Q8NEG5 633 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 PLEKHO2Q8TD55 490 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 PWWP2AQ96N64 755 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 TMEM117Q9H0C3 514 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 HSPBP1Q9NZL4 362 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 LARSQ9P2J5 1176 aaKnown RBP15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 PCDHAC2Q9Y5I4 1007 aa15.21■□□□□ 0.02
NHLRC3-204ENST00000473371 SMCHD1A6NHR9 2005 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 DDX39AO00148 427 aaKnown RBP15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 SKAP2O75563 359 aaPredicted RBP15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 RNF43Q68DV7 783 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 CGB2Q6NT52 195 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 FBF1Q8TES7 1133 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 GRK7Q8WTQ7 553 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 PAIP2Q9BPZ3 127 aaKnown RBP15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 TEKT3Q9BXF9 490 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 ADAM22Q9P0K1 906 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 POLR2MP0CAP2 368 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 ARP10275 920 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 MAN1A1P33908 653 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 CAV1Q03135 178 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 CEP55Q53EZ4 464 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 FAM47EQ6ZV65 393 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 SYDE1Q6ZW31 735 aaPredicted RBP15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 KIAA0825Q8IV33 1275 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 MAIP1Q8WWC4 291 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 CCDC77Q9BR77 488 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 TRAIPQ9BWF2 469 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 NAALADL1Q9UQQ1 740 aa15.2■□□□□ 0.02
NHLRC3-204ENST00000473371 GOLGA8IPA6NC78 632 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 GOLGA8JA6NMD2 632 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 CYP11B1P15538 503 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 IVDP26440 423 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 MAPK4P31152 587 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 MGAT5Q09328 741 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 MTFR1Q15390 333 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 PPP1R21Q6ZMI0 780 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 C7orf43Q8WVR3 580 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 PITPNM3Q9BZ71 974 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 ETNK1Q9HBU6 452 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 SLC24A3Q9HC58 644 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 ANAPC7Q9UJX3 599 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 CETPP11597 493 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 ATP2A2P16615 1042 aaKnown RBP15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 CDR2Q01850 454 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 TATDN1Q6P1N9 297 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 EP400NLQ6ZTU2 488 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 SH3BP5LQ7L8J4 393 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 ECHDC2Q86YB7 292 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 GRAMD1AQ96CP6 724 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 RAB3IPQ96QF0 476 aaPredicted RBP15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 TAF1LQ8IZX4 1826 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 GSTTP1A0A1W2PQM5 241 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 CDH16O75309 829 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 TCEA3O75764 348 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 CDC25CP30307 473 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 CCDC174Q6PII3 467 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 SHC3Q92529 594 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 DCLK3Q9C098 648 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 SLC5A4Q9NY91 659 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 FAM198AQ9UFP1 575 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 LGALS13Q9UHV8 139 aa15.19■□□□□ 0.02
NHLRC3-204ENST00000473371 QSER1Q2KHR3 1735 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 ADGRA3Q8IWK6 1321 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 GH2P01242 217 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 GYS1P13807 737 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 CCNB1P14635 433 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 TAC1P20366 129 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 IL9RQ01113 521 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 ALCAMQ13740 583 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 ACAD10Q6JQN1 1059 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 C9orf72Q96LT7 481 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 EHMT1Q9H9B1 1298 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 TXLNGQ9NUQ3 528 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 PKD2L1Q9P0L9 805 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 SORBS3O60504 671 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 UNC5CO95185 931 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 ADRA2BP18089 450 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 FOXN2P32314 431 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 SKIV2L2P42285 1042 aaKnown RBP15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 TMED2Q15363 201 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 ANKRD35Q8N283 1001 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 ATL2Q8NHH9 583 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 KCNV2Q8TDN2 545 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 KIFAP3Q92845 792 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 SEMA4DQ92854 862 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 CNKSR1Q969H4 720 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 CCDC127Q96BQ5 260 aa15.18■□□□□ 0.02
NHLRC3-204ENST00000473371 A0A1W2PRG0 241 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 RASA4BC9J798 803 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms