RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 KANK3Q6NY19 840 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 FAM43BQ6ZT52 329 aaPredicted RBP9.97□□□□□ -0.81
SMC4-214ENST00000472991 ZNF720Q7Z2F6 126 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 ECHDC2Q86YB7 292 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 NPAS4Q8IUM7 802 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 RNF169Q8NCN4 708 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 SLC17A8Q8NDX2 589 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 GLIS3Q8NEA6 775 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 PHOSPHO2Q8TCD6 241 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 TOP1MTQ969P6 601 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 CCDC51Q96ER9 411 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 BICD1Q96G01 975 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 CCDC34Q96HJ3 373 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 TIGD1Q96MW7 591 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 TARS2Q9BW92 718 aaKnown RBP9.97□□□□□ -0.81
SMC4-214ENST00000472991 MRPL4Q9BYD3 311 aaKnown RBP9.97□□□□□ -0.81
SMC4-214ENST00000472991 PDZD7Q9H5P4 517 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 LMBRD1Q9NUN5 540 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 FAM105AQ9NUU6 356 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 EXOC1Q9NV70 894 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 LRFN2Q9ULH4 789 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 TBX20Q9UMR3 447 aa9.97□□□□□ -0.81
SMC4-214ENST00000472991 CHD9Q3L8U1 2897 aa9.96□□□□□ -0.81
SMC4-214ENST00000472991 A0A0U1RQF3 1178 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 A0A1B0GUA9 196 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 PVALEFA0A1B0GWK0 134 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 HNRNPDLO14979 420 aaKnown RBP9.96□□□□□ -0.82
SMC4-214ENST00000472991 PRPF6O94906 941 aaKnown RBP9.96□□□□□ -0.82
SMC4-214ENST00000472991 STAG3L1P0CL83 205 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 MYBP10242 640 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 MYOGP15173 224 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 GATMP50440 423 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 EHHADHQ08426 723 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 ZNF568Q3ZCX4 644 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 SLC27A1Q6PCB7 646 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 MAP4K3Q8IVH8 894 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 ERCC4Q92889 916 aaPredicted RBP9.96□□□□□ -0.82
SMC4-214ENST00000472991 KCNN1Q92952 543 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 LPPQ93052 612 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 HVCN1Q96D96 273 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 ITPKCQ96DU7 683 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 ACO2Q99798 780 aaKnown RBP9.96□□□□□ -0.82
SMC4-214ENST00000472991 ADPGKQ9BRR6 497 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 TRAIPQ9BWF2 469 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 PBX4Q9BYU1 374 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 TRIM6Q9C030 488 aaPredicted RBP9.96□□□□□ -0.82
SMC4-214ENST00000472991 NXF3Q9H4D5 531 aaKnown RBP9.96□□□□□ -0.82
SMC4-214ENST00000472991 ST6GALNAC4Q9H4F1 302 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 ZFAND3Q9H8U3 227 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 SLC39A2Q9NP94 309 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 TMEM161AQ9NX61 479 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 ANKFY1Q9P2R3 1169 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 NXF1Q9UBU9 619 aaKnown RBP9.96□□□□□ -0.82
SMC4-214ENST00000472991 TNFSF13BQ9Y275 285 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 IPPQ9Y573 584 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 PCDHB7Q9Y5E2 793 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 PCDHB2Q9Y5E7 798 aa9.96□□□□□ -0.82
SMC4-214ENST00000472991 CHD7Q9P2D1 2997 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 LCHNA4D1U4 455 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 MEIS3P2A8K0S8 358 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 SOX1O00570 391 aaPredicted RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 ABLIM1O14639 778 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 ZIC2O95409 532 aaPredicted RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 PIGRP01833 764 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 RPN1P04843 607 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 FGFR1P11362 822 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 HARSP12081 509 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 SKIP12755 728 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 SCP2P22307 547 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 ABCD1P33897 745 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 LIG4P49917 911 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 FAM189BP81408 668 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 HTRA4P83105 476 aaPredicted RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 SMAD3P84022 425 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 KCNA1Q09470 495 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 ALCAMQ13740 583 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 RAB30Q15771 203 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 DCAF4L1Q3SXM0 396 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 PAN2Q504Q3 1202 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 HABP4Q5JVS0 413 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 L1TD1Q5T7N2 865 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 ZPBP2Q6X784 338 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 STXBP4Q6ZWJ1 553 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 ZBTB33Q86T24 672 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 SMG8Q8ND04 991 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 HELQQ8TDG4 1101 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 CCDC47Q96A33 483 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 ZBTB45Q96K62 511 aaPredicted RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 YME1L1Q96TA2 773 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 RAD9AQ99638 391 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 APOL6Q9BWW8 343 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 STRA6Q9BX79 667 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 CDT1Q9H211 546 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 IKZF4Q9H2S9 585 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 ELAC1Q9H777 363 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 RC3H2Q9HBD1 1191 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 RNF19AQ9NV58 838 aa9.95□□□□□ -0.82
SMC4-214ENST00000472991 HOOK1Q9UJC3 728 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 YBX2Q9Y2T7 364 aaKnown RBP9.95□□□□□ -0.82
SMC4-214ENST00000472991 MAP4K5Q9Y4K4 846 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms