RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 PCDHGB4Q9UN71 923 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 PLAGL2Q9UPG8 496 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 CDY2AQ9Y6F7 541 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 SYNGAP1Q96PV0 1343 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 CUX1P39880 1505 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 KDM5BQ9UGL1 1544 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 CFAP74Q9C0B2 1584 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 A0A1W2PPL8 197 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 A0A1W2PRQ8 180 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 UBA6A0AVT1 1052 aaPredicted RBP3.1□□□□□ -1.91
XRN1-210ENST00000472697 NOTOA8MTQ0 251 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 GSTA4O15217 222 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 FOXP2O15409 715 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 ORC4O43929 436 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 CLTBP09497 229 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 RARBP10826 455 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 MYL4P12829 197 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 YY1P25490 414 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 KLRK1P26718 216 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 HK3P52790 923 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 SNAPC2Q13487 334 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 KCNAB1Q14722 419 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 RTP5Q14D33 572 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 TBCCQ15814 346 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 FLYWCH1Q4VC44 716 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 RALGPS1Q5JS13 557 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 UBAP2Q5T6F2 1119 aaKnown RBP3.1□□□□□ -1.91
XRN1-210ENST00000472697 STEAP3Q658P3 488 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 RINLQ6ZS11 566 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 Q6ZS46 218 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 TSPYL5Q86VY4 417 aaPredicted RBP3.1□□□□□ -1.91
XRN1-210ENST00000472697 MICU3Q86XE3 530 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 HERC6Q8IVU3 1022 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 MSL3Q8N5Y2 521 aaKnown RBP3.1□□□□□ -1.91
XRN1-210ENST00000472697 LINC00116Q8NCU8 138 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 HIPK4Q8NE63 616 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 NLGN2Q8NFZ4 835 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 OR56A3Q8NH54 315 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 SLC30A5Q8TAD4 765 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 ASB11Q8WXH4 323 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 HOXB13Q92826 284 aaPredicted RBP3.1□□□□□ -1.91
XRN1-210ENST00000472697 MCRS1Q96EZ8 462 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 TBATAQ96M53 351 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 G6PC3Q9BUM1 346 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 CNPPD1Q9BV87 410 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 KCNF1Q9H3M0 494 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 RRAGCQ9HB90 399 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 PNPLA8Q9NP80 782 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 KCND1Q9NSA2 647 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 LMBRD1Q9NUN5 540 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 IMPACTQ9P2X3 320 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 TBC1D29Q9UFV1 150 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 SLC45A2Q9UMX9 530 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 GPR34Q9UPC5 381 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 PCDHGB5Q9Y5G0 923 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 BIVM-ERCC5R4GMW8 1640 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 FER1L4A9Z1Z3 1794 aa3.1□□□□□ -1.91
XRN1-210ENST00000472697 SPTLC2O15270 562 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 OIP5O43482 229 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 USO1O60763 962 aaKnown RBP3.09□□□□□ -1.91
XRN1-210ENST00000472697 ESR1P03372 595 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 MTHFD1P11586 935 aaKnown RBP3.09□□□□□ -1.91
XRN1-210ENST00000472697 RXRAP19793 462 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 NOS3P29474 1203 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 NPTX2P47972 431 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 MRPS9P82933 396 aaKnown RBP3.09□□□□□ -1.91
XRN1-210ENST00000472697 FAPQ12884 760 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 PPP2R5CQ13362 524 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 CTBP1Q13363 440 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 TSTQ16762 297 aaKnown RBP3.09□□□□□ -1.91
XRN1-210ENST00000472697 GAB4Q2WGN9 574 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 KHDC1LQ5JSQ8 128 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 ITPRIPL1Q6GPH6 555 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 MILR1Q7Z6M3 343 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 RAPGEF4Q8WZA2 1011 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 HERVK_113Q902F9 699 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 CLPTM1LQ96KA5 538 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 MRGPRX4Q96LA9 322 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 KATNAL1Q9BW62 490 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 SIL1Q9H173 461 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 MYOTQ9UBF9 498 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 CCDC39Q9UFE4 941 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 ARHGEF40Q8TER5 1519 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 POGZQ7Z3K3 1410 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 YEATS2Q9ULM3 1422 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 ZCCHC11Q5TAX3 1644 aaKnown RBP3.09□□□□□ -1.91
XRN1-210ENST00000472697 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.09□□□□□ -1.91
XRN1-210ENST00000472697 NT5C1B-RDH14C9J2C7 533 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 SKAP2O75563 359 aaPredicted RBP3.09□□□□□ -1.91
XRN1-210ENST00000472697 DGKIO75912 1065 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 XPAP23025 273 aaPredicted RBP3.09□□□□□ -1.91
XRN1-210ENST00000472697 MAP4P27816 1152 aaKnown RBP3.09□□□□□ -1.91
XRN1-210ENST00000472697 LTKP29376 864 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 HOXD12P35452 270 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 COPB2P35606 906 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 GGT5P36269 586 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 MGAT5Q09328 741 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 PDCLQ13371 301 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 SLC9A5Q14940 896 aa3.09□□□□□ -1.91
XRN1-210ENST00000472697 UVSSAQ2YD98 709 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms