RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 SCNN1GP51170 649 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 AFF1P51825 1210 aaKnown RBP13.02□□□□□ -0.33
CLRN1-205ENST00000472224 SIGLEC14Q08ET2 396 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 ADAM15Q13444 863 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 AXDND1Q5T1B0 1012 aaPredicted RBP13.02□□□□□ -0.33
CLRN1-205ENST00000472224 SFR1Q86XK3 245 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 TMEM161BQ8NDZ6 487 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 LEO1Q8WVC0 666 aaPredicted RBP13.02□□□□□ -0.33
CLRN1-205ENST00000472224 SPIRE2Q8WWL2 714 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 RSPH1Q8WYR4 309 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 STAMQ92783 540 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 ZFP42Q96MM3 310 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 TCHPQ9BT92 498 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 IGFLR1Q9H665 355 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 NRDE2Q9H7Z3 1164 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 SNTG2Q9NY99 539 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 CLEC1BQ9P126 229 aa13.02□□□□□ -0.33
CLRN1-205ENST00000472224 PDCD11Q14690 1871 aaKnown RBP13.02□□□□□ -0.33
CLRN1-205ENST00000472224 ZNF292O60281 2723 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 FRYLO94915 3013 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 ARL5CA6NH57 179 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 POLR2DO15514 142 aaKnown RBP13.01□□□□□ -0.33
CLRN1-205ENST00000472224 TRAK2O60296 914 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 RECQL4O94761 1208 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 PDGFBP01127 241 aaPredicted RBP13.01□□□□□ -0.33
CLRN1-205ENST00000472224 DNAJB1P25685 340 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 NMT1P30419 496 aaKnown RBP13.01□□□□□ -0.33
CLRN1-205ENST00000472224 ALDH7A1P49419 539 aaKnown RBP13.01□□□□□ -0.33
CLRN1-205ENST00000472224 NCKAP1LP55160 1127 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 OSTNP61366 133 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 NUCB2P80303 420 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 CAMK1Q14012 370 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 HAUS6Q7Z4H7 955 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 ZNF280BQ86YH2 543 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 SPPL3Q8TCT6 385 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 ACO2Q99798 780 aaKnown RBP13.01□□□□□ -0.33
CLRN1-205ENST00000472224 LMAN2LQ9H0V9 348 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 IRF2BPLQ9H1B7 796 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 CDT1Q9H211 546 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 GDPD2Q9HCC8 539 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 SPG21Q9NZD8 308 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 TBC1D7Q9P0N9 293 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 DNAJB4Q9UDY4 337 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 KCNG1Q9UIX4 513 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 RCOR1Q9UKL0 485 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 TNFSF13BQ9Y275 285 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 GIT1Q9Y2X7 761 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 PCDHGC5Q9Y5F6 944 aa13.01□□□□□ -0.33
CLRN1-205ENST00000472224 B4GALT3O60512 393 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 NBL1P41271 181 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 OR1G1P47890 313 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 ID4P47928 161 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 SLC11A1P49279 550 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 LIG4P49917 911 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 ZNF131P52739 623 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 ASIC1P78348 528 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 NOLC1Q14978 699 aaKnown RBP eCLIP13□□□□□ -0.33
CLRN1-205ENST00000472224 PLPP4Q5VZY2 271 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 RESP18Q5W5W9 173 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 MPZL3Q6UWV2 235 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 SLC39A11Q8N1S5 342 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 CEP120Q8N960 986 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 IQUBQ8NA54 791 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 SMRP1Q8NCR6 262 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 MICAL1Q8TDZ2 1067 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 TMEM169Q96HH4 297 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 TNMDQ9H2S6 317 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 ENTPD7Q9NQZ7 604 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 KANSL3Q9P2N6 904 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 PRG3Q9Y2Y8 225 aaPredicted RBP13□□□□□ -0.33
CLRN1-205ENST00000472224 FAM186AA6NE01 2351 aa13□□□□□ -0.33
CLRN1-205ENST00000472224 PTPRZ1P23471 2315 aaPredicted RBP13□□□□□ -0.33
CLRN1-205ENST00000472224 RIF1Q5UIP0 2472 aaKnown RBP12.99□□□□□ -0.33
CLRN1-205ENST00000472224 HNRNPDLO14979 420 aaKnown RBP12.99□□□□□ -0.33
CLRN1-205ENST00000472224 DDHD2O94830 711 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 NDUFV1P49821 464 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 KRT17Q04695 432 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 GRIK3Q13003 919 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 E2F4Q16254 413 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 TMEM173Q86WV6 379 aaPredicted RBP12.99□□□□□ -0.33
CLRN1-205ENST00000472224 CEP57L1Q8IYX8 460 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 MRPS27Q92552 414 aaKnown RBP12.99□□□□□ -0.33
CLRN1-205ENST00000472224 ZBTB45Q96K62 511 aaPredicted RBP12.99□□□□□ -0.33
CLRN1-205ENST00000472224 NTPCRQ9BSD7 190 aaKnown RBP12.99□□□□□ -0.33
CLRN1-205ENST00000472224 CCDC94Q9BW85 323 aaPredicted RBP12.99□□□□□ -0.33
CLRN1-205ENST00000472224 MFRPQ9BY79 579 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 SCAND2PQ9GZW5 306 aaPredicted RBP12.99□□□□□ -0.33
CLRN1-205ENST00000472224 CUEDC2Q9H467 287 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 MRPL44Q9H9J2 332 aaKnown RBP12.99□□□□□ -0.33
CLRN1-205ENST00000472224 PANK4Q9NVE7 773 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 MIOSQ9NXC5 875 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 PUF60Q9UHX1 559 aaKnown RBP12.99□□□□□ -0.33
CLRN1-205ENST00000472224 KCNH3Q9ULD8 1083 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 TBX20Q9UMR3 447 aa12.99□□□□□ -0.33
CLRN1-205ENST00000472224 GVINP1Q7Z2Y8 2422 aa12.98□□□□□ -0.33
CLRN1-205ENST00000472224 A0A1B0GVL5 298 aa12.98□□□□□ -0.33
CLRN1-205ENST00000472224 KRT37O76014 449 aa12.98□□□□□ -0.33
CLRN1-205ENST00000472224 GCNT3O95395 438 aa12.98□□□□□ -0.33
CLRN1-205ENST00000472224 GLP2RO95838 553 aa12.98□□□□□ -0.33
CLRN1-205ENST00000472224 GALTP07902 379 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms