RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 KRBA1A5PL33 1030 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 CCDC169A6NNP5 214 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 SLC16A4O15374 487 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 ATMINO43313 823 aaPredicted RBP8.9□□□□□ -0.98
USP48-207ENST00000471752 GLUD1P00367 558 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 GJB2P29033 226 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 NAMPTP43490 491 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 SPAG1Q07617 926 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 NCBP1Q09161 790 aaKnown RBP8.9□□□□□ -0.98
USP48-207ENST00000471752 GRIK3Q13003 919 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 TUSC3Q13454 348 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 GIT2Q14161 759 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 PDIA5Q14554 519 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 USP41Q3LFD5 358 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 ATF7IP2Q5U623 682 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 CWF19L1Q69YN2 538 aaKnown RBP8.9□□□□□ -0.98
USP48-207ENST00000471752 SCARA3Q6AZY7 606 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 ALKAL1Q6UXT8 129 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 ZBTB8OSQ8IWT0 167 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 TDRD5Q8NAT2 981 aaKnown RBP8.9□□□□□ -0.98
USP48-207ENST00000471752 DEPTORQ8TB45 409 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 SMG7Q92540 1137 aaKnown RBP8.9□□□□□ -0.98
USP48-207ENST00000471752 NECTIN4Q96NY8 510 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 CDT1Q9H211 546 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 SFXN1Q9H9B4 322 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 WDR6Q9NNW5 1121 aaKnown RBP8.9□□□□□ -0.98
USP48-207ENST00000471752 HCFC1R1Q9NWW0 138 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 COL4A3Q01955 1670 aa8.9□□□□□ -0.98
USP48-207ENST00000471752 PLXNA3P51805 1871 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 K7ERI5 159 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 N4BP3O15049 544 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 CCL16O15467 120 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 LRRN2O75325 713 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 THP07101 528 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 ADH1AP07327 375 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 CFHP08603 1231 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 HARSP12081 509 aaKnown RBP8.89□□□□□ -0.99
USP48-207ENST00000471752 TKTP29401 623 aaKnown RBP8.89□□□□□ -0.99
USP48-207ENST00000471752 GBP2P32456 591 aaPredicted RBP8.89□□□□□ -0.99
USP48-207ENST00000471752 OR1D2P34982 312 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 TRAPPC10P48553 1259 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 GUCY2FP51841 1108 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 HMGN5P82970 282 aaKnown RBP8.89□□□□□ -0.99
USP48-207ENST00000471752 MTMR3Q13615 1198 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 GNL2Q13823 731 aaKnown RBP8.89□□□□□ -0.99
USP48-207ENST00000471752 PCBP1Q15365 356 aaKnown RBP eCLIP8.89□□□□□ -0.99
USP48-207ENST00000471752 MAPK6Q16659 721 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 TMEM132AQ24JP5 1023 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 ZBTB41Q5SVQ8 909 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 FAM173BQ6P4H8 233 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 USP49Q70CQ1 688 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 GRASPQ7Z6J2 395 aaPredicted RBP8.89□□□□□ -0.99
USP48-207ENST00000471752 PPFIBP1Q86W92 1011 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 SUGP1Q8IWZ8 645 aaKnown RBP8.89□□□□□ -0.99
USP48-207ENST00000471752 SLC44A3Q8N4M1 653 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 CMASQ8NFW8 434 aaPredicted RBP8.89□□□□□ -0.99
USP48-207ENST00000471752 ERMNQ8TAM6 284 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 ITFG1Q8TB96 612 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 PRIMPOLQ96LW4 560 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 TTPALQ9BTX7 342 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 PRKD2Q9BZL6 878 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 SH2B1Q9NRF2 756 aaPredicted RBP8.89□□□□□ -0.99
USP48-207ENST00000471752 USTQ9Y2C2 406 aa8.89□□□□□ -0.99
USP48-207ENST00000471752 C2orf16Q68DN1 1984 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 DCHS1Q96JQ0 3298 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 FSD2A1L4K1 749 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 VWA3AA6NCI4 1184 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 ZMYND10O75800 440 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 PAPLNO95428 1278 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 FGFR3P22607 806 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 PROZP22891 400 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 ATP2C1P98194 919 aaPredicted RBP8.88□□□□□ -0.99
USP48-207ENST00000471752 TDGQ13569 410 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 DHX8Q14562 1220 aaKnown RBP8.88□□□□□ -0.99
USP48-207ENST00000471752 BMS1Q14692 1282 aaKnown RBP8.88□□□□□ -0.99
USP48-207ENST00000471752 PSMD5Q16401 504 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 UPP1Q16831 310 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 XKR4Q5GH76 650 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 SPECC1Q5M775 1068 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 PARM1Q6UWI2 310 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 DTHD1Q6ZMT9 781 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 CCDC149Q6ZUS6 474 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 OTOP3Q7RTS5 596 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 SIX5Q8N196 739 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 TMEM161BQ8NDZ6 487 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 FLCNQ8NFG4 579 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 PIK3R5Q8WYR1 880 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 FGF14Q92915 247 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 KIF12Q96FN5 646 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 C2orf40Q9H1Z8 148 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 FNIP2Q9P278 1114 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 ARHGAP28Q9P2N2 729 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 METRNQ9UJH8 293 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 DNM3Q9UQ16 869 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 TNFSF13BQ9Y275 285 aa8.88□□□□□ -0.99
USP48-207ENST00000471752 CLUHO75153 1309 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 TISP43B9A030 160 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 PPEF2O14830 753 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 B3GAT3O94766 335 aa8.87□□□□□ -0.99
USP48-207ENST00000471752 SEC24AO95486 1093 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms