RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 SF3B1O75533 1304 aaKnown RBP eCLIP10.13□□□□□ -0.792e-6■■■■■ 60.3
CPSF4-211ENST00000471455 EML1O00423 815 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 CCNT1O60563 726 aaKnown RBP10.13□□□□□ -0.79
CPSF4-211ENST00000471455 TSPAN1O60635 241 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 DGAT1O75907 488 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 SCNN1GP51170 649 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 PTENP60484 403 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 PRR20EP86478 221 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 PRR20CP86479 221 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 PRR20DP86480 221 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 PRR20BP86481 221 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 PRR20AP86496 221 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 DSC1Q08554 894 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 GRIK3Q13003 919 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 LIN9Q5TKA1 542 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 KIAA0319Q5VV43 1072 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 NCAPH2Q6IBW4 605 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 PHLDB3Q6NSJ2 640 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 FUT10Q6P4F1 479 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 GET4Q7L5D6 327 aaPredicted RBP10.13□□□□□ -0.79
CPSF4-211ENST00000471455 RNF168Q8IYW5 571 aaPredicted RBP10.13□□□□□ -0.79
CPSF4-211ENST00000471455 SMG8Q8ND04 991 aaKnown RBP10.13□□□□□ -0.79
CPSF4-211ENST00000471455 WASF1Q92558 559 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 BORCS6Q96GS4 357 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 NFKBIZQ9BYH8 718 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 MINDY3Q9H8M7 445 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 BRMS1Q9HCU9 246 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 FNIP2Q9P278 1114 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 CFAP54Q96N23 3096 aa10.13□□□□□ -0.79
CPSF4-211ENST00000471455 STK36Q9NRP7 1315 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 PI15O43692 258 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 NARSO43776 548 aaKnown RBP10.12□□□□□ -0.79
CPSF4-211ENST00000471455 PAPLNO95428 1278 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 AFF1P51825 1210 aaKnown RBP10.12□□□□□ -0.79
CPSF4-211ENST00000471455 TOB2Q14106 344 aaPredicted RBP10.12□□□□□ -0.79
CPSF4-211ENST00000471455 PDXDC1Q6P996 788 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 SLC27A1Q6PCB7 646 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 MTSS1LQ765P7 747 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 SLC44A3Q8N4M1 653 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 RIN2Q8WYP3 895 aaPredicted RBP10.12□□□□□ -0.79
CPSF4-211ENST00000471455 HINFPQ9BQA5 517 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 PHF20Q9BVI0 1012 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 APOL6Q9BWW8 343 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 EIF2AQ9BY44 585 aaKnown RBP10.12□□□□□ -0.79
CPSF4-211ENST00000471455 TM6SF1Q9BZW5 370 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 NT5C3AQ9H0P0 336 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 SLC2A4RGQ9NR83 387 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 CHST7Q9NS84 486 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 ANKEF1Q9NU02 776 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 ADAM28Q9UKQ2 775 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 CA14Q9ULX7 337 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 SIT1Q9Y3P8 196 aa10.12□□□□□ -0.79
CPSF4-211ENST00000471455 KRBA1A5PL33 1030 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 TGM5O43548 720 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 N4BP1O75113 896 aaKnown RBP10.11□□□□□ -0.79
CPSF4-211ENST00000471455 XYLBO75191 536 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 TADA2AO75478 443 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 RFPL2O75678 378 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 LYPLA2O95372 231 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 EFEMP2O95967 443 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 HNRNPA1P09651 372 aaKnown RBP eCLIP10.11□□□□□ -0.79
CPSF4-211ENST00000471455 LAMP2P13473 410 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 FSHRP23945 695 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 CYP4A11Q02928 519 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 MBTD1Q05BQ5 628 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 ELAVL2Q12926 359 aaKnown RBP10.11□□□□□ -0.79
CPSF4-211ENST00000471455 STK3Q13188 491 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 HTR4Q13639 388 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 NPY5RQ15761 445 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 DESI1Q6ICB0 168 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 DCLRE1AQ6PJP8 1040 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 PIK3AP1Q6ZUJ8 805 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 PALB2Q86YC2 1186 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 TPH2Q8IWU9 490 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 GPR152Q8TDT2 470 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 ZNF707Q96C28 371 aaPredicted RBP10.11□□□□□ -0.79
CPSF4-211ENST00000471455 DYDC2Q96IM9 177 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 PRIMPOLQ96LW4 560 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 ZFP42Q96MM3 310 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 MYADMQ96S97 322 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 NXF3Q9H4D5 531 aaKnown RBP10.11□□□□□ -0.79
CPSF4-211ENST00000471455 PARP2Q9UGN5 583 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 KCNJ14Q9UNX9 436 aa10.11□□□□□ -0.79
CPSF4-211ENST00000471455 TDRD15B5MCY1 1934 aaKnown RBP10.11□□□□□ -0.79
CPSF4-211ENST00000471455 ARID2Q68CP9 1835 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 DOCK8Q8NF50 2099 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 ANHXE9PGG2 379 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 ARF4P18085 180 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-211ENST00000471455 HOXA9P31269 272 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 MAGEA9P43362 315 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 SKOR1P84550 965 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 PFKPQ01813 784 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 TUSC3Q13454 348 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 CAPSQ13938 189 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 CTTNQ14247 550 aaKnown RBP10.1□□□□□ -0.79
CPSF4-211ENST00000471455 HSP90AA2PQ14568 343 aaPredicted RBP10.1□□□□□ -0.79
CPSF4-211ENST00000471455 PTPRNQ16849 979 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 TMEM132AQ24JP5 1023 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 SPECC1Q5M775 1068 aa10.1□□□□□ -0.79
CPSF4-211ENST00000471455 PPM1LQ5SGD2 360 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms