RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 UROC1Q96N76 676 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 CCDC94Q9BW85 323 aaPredicted RBP14.81□□□□□ -0.04
HMGN1-211ENST00000471260 MAN1C1Q9NR34 630 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 LARSQ9P2J5 1176 aaKnown RBP14.81□□□□□ -0.04
HMGN1-211ENST00000471260 USP20Q9Y2K6 914 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 GDAQ9Y2T3 454 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 TECTAO75443 2155 aa14.81□□□□□ -0.04
HMGN1-211ENST00000471260 GOLGA6L3A6NEY3 463 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 TMEM221A6NGB7 291 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 CASTOR2A6NHX0 329 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 C2CD4DB7Z1M9 353 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 F8W810 466 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 M0R296 226 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 HSP90AA1P07900 732 aaKnown RBP14.8□□□□□ -0.04
HMGN1-211ENST00000471260 PLA2G4BP0C869 781 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 MCF2P10911 925 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 PROZP22891 400 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 UBA7P41226 1012 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 STRN3Q13033 797 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 ZNF568Q3ZCX4 644 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 XKR4Q5GH76 650 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 DCLRE1AQ6PJP8 1040 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 ALKAL1Q6UXT8 129 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 CCDC149Q6ZUS6 474 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 ZBTB33Q86T24 672 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 UBALD2Q8IYN6 164 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 RIN2Q8WYP3 895 aaPredicted RBP14.8□□□□□ -0.04
HMGN1-211ENST00000471260 PIK3R5Q8WYR1 880 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 ACSF2Q96CM8 615 aaPredicted RBP14.8□□□□□ -0.04
HMGN1-211ENST00000471260 PPP1R10Q96QC0 940 aaKnown RBP14.8□□□□□ -0.04
HMGN1-211ENST00000471260 PAAF1Q9BRP4 392 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 TTPALQ9BTX7 342 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 CDT1Q9H211 546 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 CDH22Q9UJ99 828 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 ODF2LQ9ULJ1 636 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 SORCS3Q9UPU3 1222 aa14.8□□□□□ -0.04
HMGN1-211ENST00000471260 SLC16A4O15374 487 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 TGM5O43548 720 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 TRAK2O60296 914 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 TOM1L1O75674 476 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 KIF4AO95239 1232 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 WEE2P0C1S8 567 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 NUCB2P80303 420 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 MTMR3Q13615 1198 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 KANK3Q6NY19 840 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 LILRA6Q6PI73 481 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 MPZL3Q6UWV2 235 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 OTOP3Q7RTS5 596 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 TAS1R3Q7RTX0 852 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 TMEM161BQ8NDZ6 487 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 DDX27Q96GQ7 796 aaKnown RBP14.79□□□□□ -0.04
HMGN1-211ENST00000471260 INTS4Q96HW7 963 aaKnown RBP14.79□□□□□ -0.04
HMGN1-211ENST00000471260 TCHPQ9BT92 498 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 TARS2Q9BW92 718 aaKnown RBP14.79□□□□□ -0.04
HMGN1-211ENST00000471260 SLC38A7Q9NVC3 462 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 ZDHHC7Q9NXF8 308 aa14.79□□□□□ -0.04
HMGN1-211ENST00000471260 SMIM28A0A1B0GU29 152 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 CCDC195A0A1B0GUA6 201 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 SFI1A8K8P3 1242 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 TRAPPC3O43617 180 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 B3GAT3O94766 335 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 SP100P23497 879 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-211ENST00000471260 ABCD1P33897 745 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 SF3A1Q15459 793 aaKnown RBP14.78□□□□□ -0.04
HMGN1-211ENST00000471260 UPP1Q16831 310 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 RTP2Q5QGT7 225 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 FAM171A1Q5VUB5 890 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 ZPBP2Q6X784 338 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-211ENST00000471260 KREMEN2Q8NCW0 462 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 RABGGTAQ92696 567 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 STAMQ92783 540 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 PBXIP1Q96AQ6 731 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 ASIC4Q96FT7 647 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 ACAP3Q96P50 834 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 PLIN2Q99541 437 aa14.78□□□□□ -0.04
HMGN1-211ENST00000471260 WDR6Q9NNW5 1121 aaKnown RBP14.78□□□□□ -0.04
HMGN1-211ENST00000471260 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.78□□□□□ -0.04
HMGN1-211ENST00000471260 MTCL1Q9Y4B5 1905 aaKnown RBP14.77□□□□□ -0.04
HMGN1-211ENST00000471260 ABLIM1O14639 778 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 MAPTP10636 758 aaKnown RBP14.77□□□□□ -0.05
HMGN1-211ENST00000471260 KCNE1P15382 129 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 MRE11P49959 708 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 ARSHQ5FYA8 562 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 RTL10Q7L3V2 364 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 CEP57Q86XR8 500 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 PALB2Q86YC2 1186 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 SUGP1Q8IWZ8 645 aaKnown RBP14.77□□□□□ -0.05
HMGN1-211ENST00000471260 LNX1Q8TBB1 728 aaPredicted RBP14.77□□□□□ -0.05
HMGN1-211ENST00000471260 HASPINQ8TF76 798 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 B3GALT6Q96L58 329 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 PRRX2Q99811 253 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 CCSER1Q9C0I3 900 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 CXCL16Q9H2A7 254 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 CNTN3Q9P232 1028 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 CACNG4Q9UBN1 327 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 MYO10Q9HD67 2058 aa14.77□□□□□ -0.05
HMGN1-211ENST00000471260 VPS37CA5D8V6 355 aaPredicted RBP14.76□□□□□ -0.05
HMGN1-211ENST00000471260 CLDN3O15551 220 aa14.76□□□□□ -0.05
HMGN1-211ENST00000471260 FGFR3P22607 806 aa14.76□□□□□ -0.05
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