RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 SPTLC2O15270 562 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 MARCH6O60337 910 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 NEMFO60524 1076 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 PPP6R2O75170 966 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 ZMYND10O75800 440 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 MCM4P33991 863 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 MCM7P33993 719 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 ATP2C1P98194 919 aaPredicted RBP10.01□□□□□ -0.81
SF3A1-206ENST00000471037 CEBPZQ03701 1054 aaKnown RBP10.01□□□□□ -0.81
SF3A1-206ENST00000471037 HTR4Q13639 388 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 NBR1Q14596 966 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 PTPAQ15257 358 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 ZNF174Q15697 407 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 SLC27A1Q6PCB7 646 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 POTEGQ6S5H5 508 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 PALB2Q86YC2 1186 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 TPH2Q8IWU9 490 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 GPR152Q8TDT2 470 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 B3GALT6Q96L58 329 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 EIF2AK1Q9BQI3 630 aaKnown RBP10.01□□□□□ -0.81
SF3A1-206ENST00000471037 PIDD1Q9HB75 910 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 ARHGEF3Q9NR81 526 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 DLGAP2Q9P1A6 1054 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 FBXW11Q9UKB1 542 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 CA14Q9ULX7 337 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 ZFP37Q9Y6Q3 630 aaPredicted RBP10.01□□□□□ -0.81
SF3A1-206ENST00000471037 DOCK8Q8NF50 2099 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 DCHS1Q96JQ0 3298 aa10.01□□□□□ -0.81
SF3A1-206ENST00000471037 TDRD15B5MCY1 1934 aaKnown RBP10.01□□□□□ -0.81
SF3A1-206ENST00000471037 WNT7AO00755 349 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 B4GALT5O43286 388 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 LMNAP02545 664 aaKnown RBP10□□□□□ -0.81
SF3A1-206ENST00000471037 SPATA31D3P0C874 917 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 MYBP10242 640 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 RFX1P22670 979 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 GLRA2P23416 452 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 AKAP5P24588 427 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 PRPHP41219 470 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 RARRES1P49788 294 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 PTGDRQ13258 359 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 HSP90AA2PQ14568 343 aaPredicted RBP10□□□□□ -0.81
SF3A1-206ENST00000471037 RTP2Q5QGT7 225 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 ARL6IP4Q66PJ3 421 aaKnown RBP10□□□□□ -0.81
SF3A1-206ENST00000471037 SPATA31D4Q6ZUB0 917 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 GET4Q7L5D6 327 aaPredicted RBP10□□□□□ -0.81
SF3A1-206ENST00000471037 RIN2Q8WYP3 895 aaPredicted RBP10□□□□□ -0.81
SF3A1-206ENST00000471037 PIK3R5Q8WYR1 880 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 PRIMPOLQ96LW4 560 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 APOL6Q9BWW8 343 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 GDPD2Q9HCC8 539 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 PCDHA12Q9UN75 941 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 NUMBLQ9Y6R0 609 aa10□□□□□ -0.81
SF3A1-206ENST00000471037 SF3B1O75533 1304 aaKnown RBP eCLIP10□□□□□ -0.81
SF3A1-206ENST00000471037 MTCL1Q9Y4B5 1905 aaKnown RBP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 CACNA1AO00555 2505 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 STK25O00506 426 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 TADA2AO75478 443 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 NPTXRO95502 500 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 POU2F2P09086 479 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 HNRNPA1P09651 372 aaKnown RBP eCLIP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 OR52Z1P0C646 297 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 XRCC6P12956 609 aaKnown RBP eCLIP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 RPL17P18621 184 aaKnown RBP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 HOXA9P31269 272 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 ME1P48163 572 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 STARD6P59095 220 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 UBE2HP62256 183 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 TUSC3Q13454 348 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 NFKBIBQ15653 356 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 CALCRLQ16602 461 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 FAM187BQ17R55 369 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 CDCA2Q69YH5 1023 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 DCLRE1AQ6PJP8 1040 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 ZC3H14Q6PJT7 736 aaKnown RBP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 PRSS55Q6UWB4 352 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 CDR2LQ86X02 465 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 GLYCTKQ8IVS8 523 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 C4orf32Q8N8J7 132 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 KRI1Q8N9T8 703 aaKnown RBP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 CCDC43Q96MW1 224 aaKnown RBP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 POLR3FQ9H1D9 316 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 PRMT7Q9NVM4 692 aaPredicted RBP9.99□□□□□ -0.81
SF3A1-206ENST00000471037 SIT1Q9Y3P8 196 aa9.99□□□□□ -0.81
SF3A1-206ENST00000471037 A0A1W2PQ27 194 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 A0A1W2PQ64 194 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 A0A1W2PQD8 194 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 GOLGA6L4A6NEF3 574 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 PTGESO14684 152 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 CUTAO60888 179 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 PRPF40AO75400 957 aaKnown RBP9.98□□□□□ -0.81
SF3A1-206ENST00000471037 KIF4AO95239 1232 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 DCNP07585 359 aaKnown RBP9.98□□□□□ -0.81
SF3A1-206ENST00000471037 FSHRP23945 695 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 MARCKSP29966 332 aaPredicted RBP9.98□□□□□ -0.81
SF3A1-206ENST00000471037 ELAVL2Q12926 359 aaKnown RBP9.98□□□□□ -0.81
SF3A1-206ENST00000471037 NAB2Q15742 525 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 LIN9Q5TKA1 542 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 ADALQ6DHV7 355 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 C1orf210Q8IVY1 113 aa9.98□□□□□ -0.81
SF3A1-206ENST00000471037 MCPH1Q8NEM0 835 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms