RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 ITIH3Q06033 890 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 ACVR2BQ13705 512 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 GIT2Q14161 759 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 PPP2R5AQ15172 486 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 IFI16Q16666 785 aaKnown RBP6.18□□□□□ -1.42
HDAC8-216ENST00000470998 PRAMEF19Q5SWL8 479 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 FAM109BQ6ICB4 259 aaPredicted RBP6.18□□□□□ -1.42
HDAC8-216ENST00000470998 CACNA2D4Q7Z3S7 1137 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 KCNK18Q7Z418 384 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 SRGAP1Q7Z6B7 1085 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 KIAA1328Q86T90 577 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 C12orf56Q8IXR9 622 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 RNF10Q8N5U6 811 aaKnown RBP6.18□□□□□ -1.42
HDAC8-216ENST00000470998 PCSK9Q8NBP7 692 aaKnown RBP6.18□□□□□ -1.42
HDAC8-216ENST00000470998 KLHDC9Q8NEP7 349 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 CPLX3Q8WVH0 158 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 SCFD1Q8WVM8 642 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 PKNOX2Q96KN3 472 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 TOX2Q96NM4 488 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 MXRA8Q9BRK3 442 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 ZNF577Q9BSK1 485 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 KCTD10Q9H3F6 313 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 DEF6Q9H4E7 631 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 ST6GALNAC4Q9H4F1 302 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 ZSWIM4Q9H7M6 989 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 TMEM206Q9H813 350 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 MRPL44Q9H9J2 332 aaKnown RBP6.18□□□□□ -1.42
HDAC8-216ENST00000470998 C17orf75Q9HAS0 396 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 RAVER2Q9HCJ3 691 aaKnown RBP6.18□□□□□ -1.42
HDAC8-216ENST00000470998 LARSQ9P2J5 1176 aaKnown RBP6.18□□□□□ -1.42
HDAC8-216ENST00000470998 RNF14Q9UBS8 474 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 ARMCX3Q9UH62 379 aaPredicted RBP6.18□□□□□ -1.42
HDAC8-216ENST00000470998 DBR1Q9UK59 544 aaKnown RBP6.18□□□□□ -1.42
HDAC8-216ENST00000470998 ATP11BQ9Y2G3 1177 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 RIPK3Q9Y572 518 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 MROH7Q68CQ1 1323 aa6.18□□□□□ -1.42
HDAC8-216ENST00000470998 MYH8P13535 1937 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 RLFQ13129 1914 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 CCDC151A5D8V7 595 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 ARHGEF35A5YM69 484 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 BTNL10A8MVZ5 291 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 E9PMD0 336 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 SOX1O00570 391 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 P4HA2O15460 535 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 TACC1O75410 805 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 ERLIN1O75477 346 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 CABYRO75952 493 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 SNAI1O95863 264 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 AFPP02771 609 aaKnown RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 SERPING1P05155 500 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 CLTBP09497 229 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 CD33P20138 364 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 NR2F2P24468 414 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 GJA9P57773 515 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 CHMP4BP1P59074 171 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 TNP2Q05952 138 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 CETN1Q12798 172 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 ADAM9Q13443 819 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 LAMC2Q13753 1193 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 UBAP2LQ14157 1087 aaKnown RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 BRD3Q15059 726 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 TRIM60Q495X7 471 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 ZNF569Q5MCW4 686 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 CCSAPQ6IQ19 270 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 CCDC70Q6NSX1 233 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 PDXDC1Q6P996 788 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 TMCO3Q6UWJ1 677 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 ARMCX2Q7L311 632 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 ANKRD33Q7Z3H0 272 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 USP37Q86T82 979 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 NLRX1Q86UT6 975 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 VPS36Q86VN1 386 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 SFR1Q86XK3 245 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 FAM178BQ8IXR5 827 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 SMAP1Q8IYB5 467 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 FAM133AQ8N9E0 248 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 KCNN1Q92952 543 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 SECISBP2LQ93073 1101 aaKnown RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 JAKMIP2Q96AA8 810 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 GPRASP2Q96D09 838 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 SUSD3Q96L08 255 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 DRC1Q96MC2 740 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 GLT1D1Q96MS3 346 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 CCDC43Q96MW1 224 aaKnown RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 MPHOSPH6Q99547 160 aaKnown RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 REEP2Q9BRK0 252 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 DESI2Q9BSY9 194 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 OXCT2Q9BYC2 517 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 UPF3AQ9H1J1 476 aaKnown RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 BHMT2Q9H2M3 363 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 NHEJ1Q9H9Q4 299 aaPredicted RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 LZTFL1Q9NQ48 299 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 A1CFQ9NQ94 594 aaKnown RBP6.17□□□□□ -1.42
HDAC8-216ENST00000470998 JADE2Q9NQC1 790 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 STARD7Q9NQZ5 370 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 PDLIM7Q9NR12 457 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 RNF146Q9NTX7 359 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 OGFRQ9NZT2 677 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 MARK1Q9P0L2 795 aa6.17□□□□□ -1.42
HDAC8-216ENST00000470998 GDF2Q9UK05 429 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms