RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 SNRPA1P09661 255 aaKnown RBP7.32□□□□□ -1.24
COL11A1-208ENST00000470170 OSMP13725 252 aa7.32□□□□□ -1.24
COL11A1-208ENST00000470170 DDX6P26196 483 aaKnown RBP eCLIP7.32□□□□□ -1.24
COL11A1-208ENST00000470170 BMPR1AP36894 532 aa7.32□□□□□ -1.24
COL11A1-208ENST00000470170 SP140Q13342 867 aa7.32□□□□□ -1.24
COL11A1-208ENST00000470170 NOMO1Q15155 1222 aa7.32□□□□□ -1.24
COL11A1-208ENST00000470170 KRT26Q7Z3Y9 468 aa7.32□□□□□ -1.24
COL11A1-208ENST00000470170 CMTR2Q8IYT2 770 aaKnown RBP7.32□□□□□ -1.24
COL11A1-208ENST00000470170 WDR66Q8TBY9 1149 aa7.32□□□□□ -1.24
COL11A1-208ENST00000470170 FPGT-TNNI3KV9GXZ4 949 aa7.32□□□□□ -1.24
COL11A1-208ENST00000470170 MARCH11A6NNE9 402 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 LMNAP02545 664 aaKnown RBP7.31□□□□□ -1.24
COL11A1-208ENST00000470170 VIL1P09327 827 aaKnown RBP7.31□□□□□ -1.24
COL11A1-208ENST00000470170 RAP2AP10114 183 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 CPEP16870 476 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 ADRA1BP35368 520 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 MCAMP43121 646 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 GUCY1B3Q02153 619 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 MALLQ13021 153 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 TP53BP2Q13625 1128 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 ANO4Q32M45 955 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 AGAP9Q5VTM2 703 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 FAM180AQ6UWF9 173 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 MED25Q71SY5 747 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 SPATS2Q86XZ4 545 aaKnown RBP7.31□□□□□ -1.24
COL11A1-208ENST00000470170 LCORLQ8N3X6 602 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 OR56A1Q8NGH5 318 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 MRI1Q9BV20 369 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 ADI1Q9BV57 179 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 SENP6Q9GZR1 1112 aaPredicted RBP7.31□□□□□ -1.24
COL11A1-208ENST00000470170 TOR3AQ9H497 397 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 LANCL2Q9NS86 450 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 ZBTB21Q9ULJ3 1066 aa7.31□□□□□ -1.24
COL11A1-208ENST00000470170 PPFIA2O75334 1257 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 HLA-DOAP06340 250 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 FPR1P21462 350 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 ALDH1A3P47895 512 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 USP14P54578 494 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 FAPQ12884 760 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 RESTQ13127 1097 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 RRP12Q5JTH9 1297 aaKnown RBP7.3□□□□□ -1.24
COL11A1-208ENST00000470170 KRTAP5-3Q6L8H2 238 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 ZNF575Q86XF7 245 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 RHOT2Q8IXI1 618 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 ATP11BQ9Y2G3 1177 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 PCDHGA2Q9Y5H1 932 aa7.3□□□□□ -1.24
COL11A1-208ENST00000470170 CLSTN1O94985 981 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 SPDEFO95238 335 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 NUDT3O95989 172 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 GSPT1P15170 499 aaKnown RBP7.29□□□□□ -1.24
COL11A1-208ENST00000470170 GUCY1A2P33402 732 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 MTNR1BP49286 362 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 ERVK-21P61565 698 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 SEPT2Q15019 361 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 GJC2Q5T442 439 aaPredicted RBP7.29□□□□□ -1.24
COL11A1-208ENST00000470170 SUPT20HQ8NEM7 779 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 ASB10Q8WXI3 467 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 KLHL11Q9NVR0 708 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 SYBUQ9NX95 663 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 MOCS1Q9NZB8 636 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 AJAP1Q9UKB5 411 aaPredicted RBP7.29□□□□□ -1.24
COL11A1-208ENST00000470170 SIK3Q9Y2K2 1263 aa7.29□□□□□ -1.24
COL11A1-208ENST00000470170 CFIP05156 583 aa7.28□□□□□ -1.24
COL11A1-208ENST00000470170 ELANEP08246 267 aa7.28□□□□□ -1.24
COL11A1-208ENST00000470170 IL2RBP14784 551 aa7.28□□□□□ -1.24
COL11A1-208ENST00000470170 ATP5JP18859 108 aa7.28□□□□□ -1.24
COL11A1-208ENST00000470170 POU3F3P20264 500 aaPredicted RBP7.28□□□□□ -1.24
COL11A1-208ENST00000470170 SLC5A3P53794 718 aa7.28□□□□□ -1.24
COL11A1-208ENST00000470170 TAP1Q03518 808 aa7.28□□□□□ -1.24
COL11A1-208ENST00000470170 TSHZ3Q63HK5 1081 aa7.28□□□□□ -1.24
COL11A1-208ENST00000470170 DRC7Q8IY82 874 aa7.28□□□□□ -1.24
COL11A1-208ENST00000470170 SLC2A13Q96QE2 648 aa7.28□□□□□ -1.24
COL11A1-208ENST00000470170 ZSWIM1Q9BR11 485 aa7.28□□□□□ -1.24
COL11A1-208ENST00000470170 PIPSLA2A3N6 862 aa7.27□□□□□ -1.25
COL11A1-208ENST00000470170 SLC6A9P48067 706 aa7.27□□□□□ -1.25
COL11A1-208ENST00000470170 RNF219Q5W0B1 726 aaPredicted RBP7.27□□□□□ -1.25
COL11A1-208ENST00000470170 OLFML1Q6UWY5 402 aa7.27□□□□□ -1.25
COL11A1-208ENST00000470170 MAPKAPK5Q8IW41 473 aa7.27□□□□□ -1.25
COL11A1-208ENST00000470170 OR2I1PQ8NGU4 316 aa7.27□□□□□ -1.25
COL11A1-208ENST00000470170 ATL2Q8NHH9 583 aa7.27□□□□□ -1.25
COL11A1-208ENST00000470170 FUBP3Q96I24 572 aaKnown RBP eCLIP7.27□□□□□ -1.25
COL11A1-208ENST00000470170 MYOCQ99972 504 aa7.27□□□□□ -1.25
COL11A1-208ENST00000470170 SLC23A1Q9UHI7 598 aa7.27□□□□□ -1.25
COL11A1-208ENST00000470170 ZNHIT2Q9UHR6 403 aa7.27□□□□□ -1.25
COL11A1-208ENST00000470170 DNM3Q9UQ16 869 aa7.27□□□□□ -1.25
COL11A1-208ENST00000470170 ACTL7AQ9Y615 435 aa7.27□□□□□ -1.25
COL11A1-208ENST00000470170 EPN1Q9Y6I3 576 aaPredicted RBP7.27□□□□□ -1.25
COL11A1-208ENST00000470170 CDKL5O76039 1030 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 ENDOD1O94919 500 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 TGM1P22735 817 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 SLC6A2P23975 617 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 PCSK1P29120 753 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 AVPR1BP47901 424 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 OCA2Q04671 838 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 MGAT2Q10469 447 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 ZNF529Q6P280 563 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 CCHCR1Q8TD31 782 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 LINC00476Q8WZB0 136 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 CAVIN3Q969G5 261 aa7.26□□□□□ -1.25
COL11A1-208ENST00000470170 RIOX1Q9H6W3 641 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms