RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 NPIPB8E9PQR5 432 aa5.22□□□□□ -1.57
BRCA2-202ENST00000470094 DDCP20711 480 aa5.22□□□□□ -1.57
BRCA2-202ENST00000470094 FPR1P21462 350 aa5.22□□□□□ -1.57
BRCA2-202ENST00000470094 APOBEC3AP31941 199 aaPredicted RBP5.22□□□□□ -1.57
BRCA2-202ENST00000470094 ALDH1A3P47895 512 aa5.22□□□□□ -1.57
BRCA2-202ENST00000470094 ADKP55263 362 aaKnown RBP5.22□□□□□ -1.57
BRCA2-202ENST00000470094 ODF1Q14990 250 aa5.22□□□□□ -1.57
BRCA2-202ENST00000470094 DRC7Q8IY82 874 aa5.22□□□□□ -1.57
BRCA2-202ENST00000470094 DCLRE1CQ96SD1 692 aaKnown RBP5.22□□□□□ -1.57
BRCA2-202ENST00000470094 TDP1Q9NUW8 608 aa5.22□□□□□ -1.57
BRCA2-202ENST00000470094 DDX56Q9NY93 547 aaKnown RBP5.22□□□□□ -1.57
BRCA2-202ENST00000470094 ACTL7AQ9Y615 435 aa5.22□□□□□ -1.57
BRCA2-202ENST00000470094 MYBBP1AQ9BQG0 1328 aaKnown RBP5.22□□□□□ -1.57
BRCA2-202ENST00000470094 CCDC154A6NI56 674 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 GRXCR1A8MXD5 290 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 WNT10BO00744 389 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 HTRA2O43464 458 aaPredicted RBP5.21□□□□□ -1.58
BRCA2-202ENST00000470094 FZD7O75084 574 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 ZNF202O95125 648 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 PEX11BO96011 259 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 PDGFRBP09619 1106 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 PCSK1P29120 753 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 NEK2P51955 445 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 NHLH2Q02577 135 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 CSRP2Q16527 193 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 ATP2B3Q16720 1220 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 OTUD7BQ6GQQ9 843 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 PPP4R3AQ6IN85 833 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 USP51Q70EK9 711 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 RSPH3Q86UC2 560 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 MIER2Q8N344 545 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 ZNF276Q8N554 614 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 SLC25A43Q8WUT9 341 aaPredicted RBP5.21□□□□□ -1.58
BRCA2-202ENST00000470094 COA7Q96BR5 231 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 LIMCH1Q9UPQ0 1083 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 RUVBL1Q9Y265 456 aaKnown RBP5.21□□□□□ -1.58
BRCA2-202ENST00000470094 LUC7L2Q9Y383 392 aaKnown RBP5.21□□□□□ -1.58
BRCA2-202ENST00000470094 REXO2Q9Y3B8 237 aaKnown RBP5.21□□□□□ -1.58
BRCA2-202ENST00000470094 IPPQ9Y573 584 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 PCDHA13Q9Y5I0 950 aa5.21□□□□□ -1.58
BRCA2-202ENST00000470094 DIRC3C9JPN6 131 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 LEFTY2O00292 366 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 SGTAO43765 313 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 POMCP01189 267 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 AMY1AP04745 511 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 RPLP2P05387 115 aaKnown RBP5.2□□□□□ -1.58
BRCA2-202ENST00000470094 RNASE9P60153 205 aaKnown RBP5.2□□□□□ -1.58
BRCA2-202ENST00000470094 SLC25A3Q00325 362 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 CDC42EP1Q00587 391 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 MTM1Q13496 603 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 TMEM240Q5SV17 173 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 ZNF529Q6P280 563 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 SEM1Q6ZVN7 128 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 SYT12Q8IV01 421 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 SYNE4Q8N205 404 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 ZGPATQ8N5A5 531 aaKnown RBP5.2□□□□□ -1.58
BRCA2-202ENST00000470094 ZNF483Q8TF39 744 aaPredicted RBP5.2□□□□□ -1.58
BRCA2-202ENST00000470094 PHACTR3Q96KR7 559 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 AASDHPPTQ9NRN7 309 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 TRPM5Q9NZQ8 1165 aa5.2□□□□□ -1.58
BRCA2-202ENST00000470094 DRGXA6NNA5 263 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 PPFIA4O75335 1185 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 RPS6KA4O75676 772 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 ALDH1L1O75891 902 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 ZRANB2O95218 330 aaKnown RBP eCLIP5.19□□□□□ -1.58
BRCA2-202ENST00000470094 SPATA31D3P0C874 917 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 ALAS1P13196 640 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 PTGS2P35354 604 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 GDF5P43026 501 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 CHN2P52757 468 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 ATP8B2P98198 1209 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 CREMQ03060 361 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 IL10RAQ13651 578 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 C3orf36Q3SXR2 165 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 SPATA31D4Q6ZUB0 917 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 GDF7Q7Z4P5 450 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 PLXDC1Q8IUK5 500 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 CMTR2Q8IYT2 770 aaKnown RBP5.19□□□□□ -1.58
BRCA2-202ENST00000470094 Q8N1X5 172 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 STAG1Q8WVM7 1258 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 RAB24Q969Q5 203 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 TMX3Q96JJ7 454 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 SLC46A2Q9BY10 475 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 REXO4Q9GZR2 422 aaKnown RBP5.19□□□□□ -1.58
BRCA2-202ENST00000470094 NRDE2Q9H7Z3 1164 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 SLC2A4RGQ9NR83 387 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.19□□□□□ -1.58
BRCA2-202ENST00000470094 SLC23A1Q9UHI7 598 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 SERPINB13Q9UIV8 391 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 HS3ST3A1Q9Y663 406 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 PNPLA7Q6ZV29 1317 aa5.19□□□□□ -1.58
BRCA2-202ENST00000470094 AHRRA9YTQ3 701 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 NARSO43776 548 aaKnown RBP5.18□□□□□ -1.58
BRCA2-202ENST00000470094 DTNBO60941 627 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 IL33O95760 270 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 FSHBP01225 129 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 ZSCAN20P17040 1043 aaPredicted RBP5.18□□□□□ -1.58
BRCA2-202ENST00000470094 MAKP20794 623 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 EDNRBP24530 442 aa5.18□□□□□ -1.58
BRCA2-202ENST00000470094 MCM7P33993 719 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms