RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 FAM212AQ96EL1 285 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 KATNAL1Q9BW62 490 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 CDT1Q9H211 546 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 CPSF3Q9UKF6 684 aaKnown RBP19.59■□□□□ 0.73
SMC4-211ENST00000469858 GINS2Q9Y248 185 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 MACROD2A1Z1Q3 448 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 TRPA1O75762 1119 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 URI1O94763 535 aaPredicted RBP19.59■□□□□ 0.73
SMC4-211ENST00000469858 CCDC172P0C7W6 258 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 CYP2C9P11712 490 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 OSTNP61366 133 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 HIC1Q14526 733 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 ZNF410Q86VK4 478 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 VPS36Q86VN1 386 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 CEP120Q8N960 986 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 VTI1AQ96AJ9 217 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 CPB2Q96IY4 423 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 KREMEN1Q96MU8 473 aa19.59■□□□□ 0.73
SMC4-211ENST00000469858 LUC7LQ9NQ29 371 aaKnown RBP19.59■□□□□ 0.73
SMC4-211ENST00000469858 MBLAC1A4D2B0 266 aaPredicted RBP19.58■□□□□ 0.73
SMC4-211ENST00000469858 HLA-DRAP01903 254 aa19.58■□□□□ 0.73
SMC4-211ENST00000469858 MFAP3P55082 362 aa19.58■□□□□ 0.73
SMC4-211ENST00000469858 RUFY4Q6ZNE9 571 aa19.58■□□□□ 0.73
SMC4-211ENST00000469858 OR5B17Q8NGF7 314 aa19.58■□□□□ 0.73
SMC4-211ENST00000469858 HELQQ8TDG4 1101 aa19.58■□□□□ 0.73
SMC4-211ENST00000469858 SMIM35A0A1B0GVV1 85 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 ERLIN2O94905 339 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 ARF4P18085 180 aaPredicted RBP19.57■□□□□ 0.72
SMC4-211ENST00000469858 USP8P40818 1118 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 CACNB2Q08289 660 aaPredicted RBP19.57■□□□□ 0.72
SMC4-211ENST00000469858 GNASQ5JWF2 1037 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 TXLNBQ8N3L3 684 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 TATDN2Q93075 761 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 PDZD7Q9H5P4 517 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 RNF186Q9NXI6 227 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 SEPT4O43236 478 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 VNN1O95497 513 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 PGK1P00558 417 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 ELNP15502 786 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 ANXA13P27216 316 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 GJA9P57773 515 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 ADAM17P78536 824 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 ZNF200P98182 395 aaPredicted RBP19.57■□□□□ 0.72
SMC4-211ENST00000469858 SRGAP1Q7Z6B7 1085 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 SECISBP2LQ93073 1101 aaKnown RBP19.57■□□□□ 0.72
SMC4-211ENST00000469858 C1orf112Q9NSG2 853 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 HDAC6Q9UBN7 1215 aa19.57■□□□□ 0.72
SMC4-211ENST00000469858 GPR25O00155 361 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 PJA2O43164 708 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 TREHO43280 583 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 TSPAN1O60635 241 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 ZC3H11AO75152 810 aaKnown RBP eCLIP19.56■□□□□ 0.724e-12■■■■■ 110
SMC4-211ENST00000469858 PHACTR2O75167 634 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 FGFR4P22455 802 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 WDR44Q5JSH3 913 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 WDR49Q8IV35 697 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 C7orf31Q8N865 590 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 CD99L2Q8TCZ2 262 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 ADAMTS10Q9H324 1103 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 L2HGDHQ9H9P8 463 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 NAGPAQ9UK23 515 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 MYH10P35580 1976 aa19.56■□□□□ 0.72
SMC4-211ENST00000469858 C17orf102A2RUQ5 167 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 CTAGE9A4FU28 777 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 DDX3XO00571 662 aaKnown RBP eCLIP19.55■□□□□ 0.724e-78■■■■■ 527.9
SMC4-211ENST00000469858 CLSTN1O94985 981 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 RARBP10826 455 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 BMS1Q14692 1282 aaKnown RBP19.55■□□□□ 0.72
SMC4-211ENST00000469858 SURF1Q15526 300 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 TMEM192Q8IY95 271 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 DNAJB3Q8WWF6 145 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 SHC3Q92529 594 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 PACSIN1Q9BY11 444 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 SPC25Q9HBM1 224 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 GPR32O75388 356 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 CXCL8P10145 99 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 MCF2P10911 925 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 ALKBH5Q6P6C2 394 aaKnown RBP19.55■□□□□ 0.72
SMC4-211ENST00000469858 GLYCTKQ8IVS8 523 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 LNX1Q8TBB1 728 aaPredicted RBP19.55■□□□□ 0.72
SMC4-211ENST00000469858 OSMRQ99650 979 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 NAPGQ99747 312 aaPredicted RBP19.55■□□□□ 0.72
SMC4-211ENST00000469858 GCOM2Q9BZD3 368 aaPredicted RBP19.55■□□□□ 0.72
SMC4-211ENST00000469858 MTMR12Q9C0I1 747 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 RPF1Q9H9Y2 349 aaKnown RBP19.55■□□□□ 0.72
SMC4-211ENST00000469858 CDHR5Q9HBB8 845 aa19.55■□□□□ 0.72
SMC4-211ENST00000469858 SCN10AQ9Y5Y9 1956 aa19.54■□□□□ 0.72
SMC4-211ENST00000469858 KPNA6O60684 536 aa19.54■□□□□ 0.72
SMC4-211ENST00000469858 PRKAR2AP13861 404 aaKnown RBP19.54■□□□□ 0.72
SMC4-211ENST00000469858 CCND3P30281 292 aaPredicted RBP19.54■□□□□ 0.72
SMC4-211ENST00000469858 AP3M2P53677 418 aa19.54■□□□□ 0.72
SMC4-211ENST00000469858 CDC42EP1Q00587 391 aa19.54■□□□□ 0.72
SMC4-211ENST00000469858 GCNT1Q02742 428 aa19.54■□□□□ 0.72
SMC4-211ENST00000469858 NAB2Q15742 525 aa19.54■□□□□ 0.72
SMC4-211ENST00000469858 SPOPLQ6IQ16 392 aa19.54■□□□□ 0.72
SMC4-211ENST00000469858 CXCL17Q6UXB2 119 aa19.54■□□□□ 0.72
SMC4-211ENST00000469858 FAM71AQ8IYT1 594 aa19.54■□□□□ 0.72
SMC4-211ENST00000469858 DHX38Q92620 1227 aaKnown RBP19.54■□□□□ 0.72
SMC4-211ENST00000469858 MTG1Q9BT17 334 aaPredicted RBP19.54■□□□□ 0.72
SMC4-211ENST00000469858 SYT11Q9BT88 431 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms