RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 UMODL1Q5DID0 1318 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 ZNF233A6NK53 670 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 K7ERI5 159 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 FZD9O00144 591 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 O00370 1275 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 CYP11B1P15538 503 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 SFNP31947 248 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 GUCY1A3Q02108 690 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 ORC1Q13415 861 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 GNPTABQ3T906 1256 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 DPH6Q7L8W6 267 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 REPS2Q8NFH8 660 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 DEPTORQ8TB45 409 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 ZNF302Q9NR11 478 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 PARP14Q460N5 1801 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 KIAA1217Q5T5P2 1943 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 USP2O75604 605 aaPredicted RBP10.11□□□□□ -0.79
TOP3A-203ENST00000469739 TMEM253P0C7T8 217 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 MAPTP10636 758 aaKnown RBP10.11□□□□□ -0.79
TOP3A-203ENST00000469739 PAX3P23760 479 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 HOXA7P31268 230 aaPredicted RBP10.11□□□□□ -0.79
TOP3A-203ENST00000469739 TNFSF9P41273 254 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 NCKAP1LP55160 1127 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 GNGT1P63211 74 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 STXBP2Q15833 593 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 C10orf76Q5T2E6 689 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 RNF217Q8TC41 542 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 C1orf54Q8WWF1 131 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 ACSF2Q96CM8 615 aaPredicted RBP10.11□□□□□ -0.79
TOP3A-203ENST00000469739 ATP6V0A4Q9HBG4 840 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 RNF19AQ9NV58 838 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 FBXL5Q9UKA1 691 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 PNMA2Q9UL42 364 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 EXOC7Q9UPT5 735 aa10.11□□□□□ -0.79
TOP3A-203ENST00000469739 TPD52L2O43399 206 aaKnown RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 PYGMP11217 842 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 RPS12P25398 132 aaKnown RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 PDE6CP51160 858 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 GPC5P78333 572 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 FMO1Q01740 532 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 STRN3Q13033 797 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 ODF2Q5BJF6 829 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 TMEM270Q6UE05 265 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 PRUNE1Q86TP1 453 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 SLC9A9Q8IVB4 645 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 MAP4K3Q8IVH8 894 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 OR5B17Q8NGF7 314 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 ATG4AQ8WYN0 398 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 PBKQ96KB5 322 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 C11orf70Q9BRQ4 267 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 HAPLN2Q9GZV7 340 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 GDF3Q9NR23 364 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 HOXC10Q9NYD6 342 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 CNOT8Q9UFF9 292 aaKnown RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 TRPC6Q9Y210 931 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 GINS2Q9Y248 185 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 DDX3YO15523 660 aaKnown RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 GGPS1O95749 300 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 CALRP27797 417 aaKnown RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 CTNNA1P35221 906 aaKnown RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 PIK3CAP42336 1068 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 MFAP3P55082 362 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 CYP24A1Q07973 514 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 NEDD9Q14511 834 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 MIS18BP1Q6P0N0 1132 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 EMBQ6PCB8 327 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 THNSL1Q8IYQ7 743 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 ZDHHC14Q8IZN3 488 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 SYCE1Q8N0S2 351 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 GPD1LQ8N335 351 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 ZNF564Q8TBZ8 553 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 HELQQ8TDG4 1101 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 SCFD2Q8WU76 684 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 SLC7A3Q8WY07 619 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 MAGOHBQ96A72 148 aaKnown RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 MIEF2Q96C03 454 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 HES6Q96HZ4 224 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 CABS1Q96KC9 395 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 NLRP4Q96MN2 994 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 TAF1DQ9H5J8 278 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 CLDN3O15551 220 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 DGAT1O75907 488 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 UBA1P22314 1058 aaKnown RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 GLRA2P23416 452 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 SLCO1A2P46721 670 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 PPATQ06203 517 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 HSDL1Q3SXM5 330 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 EAPPQ56P03 285 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 ABHD15Q6UXT9 468 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 NIPA1Q7RTP0 329 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 TAB3Q8N5C8 712 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 GPRASP2Q96D09 838 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 MRRFQ96E11 262 aaKnown RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 CYFIP2Q96F07 1278 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 MSTO1Q9BUK6 570 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 ANKEF1Q9NU02 776 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 SUCLA2Q9P2R7 463 aaPredicted RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 ANAPC7Q9UJX3 599 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 AGO2Q9UKV8 859 aaKnown RBP10.1□□□□□ -0.79
TOP3A-203ENST00000469739 STXBP5LQ9Y2K9 1186 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms