RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 SLC38A7Q9NVC3 462 aa23.32■■□□□ 1.32
RTN4R-205ENST00000469601 FBXO2Q9UK22 296 aaPredicted RBP23.32■■□□□ 1.32
RTN4R-205ENST00000469601 NPHP3-ACAD11A0A0J9YXS1 232 aa23.31■■□□□ 1.32
RTN4R-205ENST00000469601 NCKAP1LP55160 1127 aa23.31■■□□□ 1.32
RTN4R-205ENST00000469601 NAB2Q15742 525 aa23.31■■□□□ 1.32
RTN4R-205ENST00000469601 HERC4Q5GLZ8 1057 aaPredicted RBP23.31■■□□□ 1.32
RTN4R-205ENST00000469601 RARS2Q5T160 578 aaKnown RBP23.31■■□□□ 1.32
RTN4R-205ENST00000469601 MYCT1Q8N699 235 aa23.31■■□□□ 1.32
RTN4R-205ENST00000469601 FNIP2Q9P278 1114 aa23.31■■□□□ 1.32
RTN4R-205ENST00000469601 STK17AQ9UEE5 414 aa23.31■■□□□ 1.32
RTN4R-205ENST00000469601 TEX28O15482 410 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 CLDN3O15551 220 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 TBCAO75347 108 aaKnown RBP23.3■■□□□ 1.32
RTN4R-205ENST00000469601 GLUD1P00367 558 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 ZNF131P52739 623 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 CACNB1Q02641 598 aaPredicted RBP23.3■■□□□ 1.32
RTN4R-205ENST00000469601 CEBPZQ03701 1054 aaKnown RBP23.3■■□□□ 1.32
RTN4R-205ENST00000469601 MCM6Q14566 821 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 SLC39A14Q15043 492 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 FAM173BQ6P4H8 233 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 PDXDC1Q6P996 788 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 HAUS6Q7Z4H7 955 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 RIN2Q8WYP3 895 aaPredicted RBP23.3■■□□□ 1.32
RTN4R-205ENST00000469601 RABGGTAQ92696 567 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 BICD1Q96G01 975 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 EPSTI1Q96J88 318 aa23.3■■□□□ 1.32
RTN4R-205ENST00000469601 PPP1R10Q96QC0 940 aaKnown RBP23.3■■□□□ 1.32
RTN4R-205ENST00000469601 SMIM28A0A1B0GU29 152 aa23.29■■□□□ 1.32
RTN4R-205ENST00000469601 KIF4AO95239 1232 aa23.29■■□□□ 1.32
RTN4R-205ENST00000469601 OSTNP61366 133 aa23.29■■□□□ 1.32
RTN4R-205ENST00000469601 NOLC1Q14978 699 aaKnown RBP eCLIP23.29■■□□□ 1.32
RTN4R-205ENST00000469601 XKR4Q5GH76 650 aa23.29■■□□□ 1.32
RTN4R-205ENST00000469601 DCLRE1AQ6PJP8 1040 aa23.29■■□□□ 1.32
RTN4R-205ENST00000469601 C12orf76Q8N812 135 aaPredicted RBP23.29■■□□□ 1.32
RTN4R-205ENST00000469601 KRI1Q8N9T8 703 aaKnown RBP23.29■■□□□ 1.32
RTN4R-205ENST00000469601 HDAC7Q8WUI4 952 aa23.29■■□□□ 1.32
RTN4R-205ENST00000469601 DDX27Q96GQ7 796 aaKnown RBP23.29■■□□□ 1.32
RTN4R-205ENST00000469601 PAAF1Q9BRP4 392 aa23.29■■□□□ 1.32
RTN4R-205ENST00000469601 LRFN3Q9BTN0 628 aa23.29■■□□□ 1.32
RTN4R-205ENST00000469601 TTPALQ9BTX7 342 aa23.29■■□□□ 1.32
RTN4R-205ENST00000469601 ANKFY1Q9P2R3 1169 aa23.29■■□□□ 1.32
RTN4R-205ENST00000469601 TMEM189-UBE2V1I3L0A0 370 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 ABLIM1O14639 778 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 TRAPPC3O43617 180 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 MCL1Q07820 350 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 KYAT1Q16773 422 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 GLRA4Q5JXX5 417 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 RRAGBQ5VZM2 374 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 ALKAL1Q6UXT8 129 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 CEP120Q8N960 986 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 ZNF396Q96N95 335 aaPredicted RBP23.28■■□□□ 1.32
RTN4R-205ENST00000469601 USP28Q96RU2 1077 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 ZHX3Q9H4I2 956 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 CACNG4Q9UBN1 327 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 MUTYHQ9UIF7 546 aa23.28■■□□□ 1.32
RTN4R-205ENST00000469601 PRR33A8MZF0 331 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 K7ENM7 598 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 TRAK2O60296 914 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 B3GAT3O94766 335 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 HARSP12081 509 aaKnown RBP23.27■■□□□ 1.32
RTN4R-205ENST00000469601 KCNE1P15382 129 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 COL9A1P20849 921 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 MATR3P43243 847 aaKnown RBP eCLIP23.27■■□□□ 1.32
RTN4R-205ENST00000469601 SPECC1Q5M775 1068 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 FAM171A1Q5VUB5 890 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 CYP26C1Q6V0L0 522 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 C15orf39Q6ZRI6 1047 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 CCDC73Q6ZRK6 1079 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 GPR149Q86SP6 731 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 CMASQ8NFW8 434 aaPredicted RBP23.27■■□□□ 1.32
RTN4R-205ENST00000469601 LRRC15Q8TF66 581 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 HASPINQ8TF76 798 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 B3GALT6Q96L58 329 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 SNX27Q96L92 541 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 CXCL16Q9H2A7 254 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 PLEKHA4Q9H4M7 779 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 POMKQ9H5K3 350 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 MAN1C1Q9NR34 630 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 TBX20Q9UMR3 447 aa23.27■■□□□ 1.32
RTN4R-205ENST00000469601 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.27■■□□□ 1.32
RTN4R-205ENST00000469601 NASPP49321 788 aaPredicted RBP23.26■■□□□ 1.31
RTN4R-205ENST00000469601 LIG4P49917 911 aa23.26■■□□□ 1.31
RTN4R-205ENST00000469601 STK38Q15208 465 aa23.26■■□□□ 1.31
RTN4R-205ENST00000469601 TMC5Q6UXY8 1006 aa23.26■■□□□ 1.31
RTN4R-205ENST00000469601 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.26■■□□□ 1.31
RTN4R-205ENST00000469601 USP49Q70CQ1 688 aa23.26■■□□□ 1.31
RTN4R-205ENST00000469601 CEP57Q86XR8 500 aa23.26■■□□□ 1.31
RTN4R-205ENST00000469601 PIK3R5Q8WYR1 880 aa23.26■■□□□ 1.31
RTN4R-205ENST00000469601 ZBTB45Q96K62 511 aaPredicted RBP23.26■■□□□ 1.31
RTN4R-205ENST00000469601 CLIC6Q96NY7 704 aa23.26■■□□□ 1.31
RTN4R-205ENST00000469601 PLEKHA5Q9HAU0 1116 aa23.26■■□□□ 1.31
RTN4R-205ENST00000469601 TSHZ2Q9NRE2 1034 aa23.26■■□□□ 1.31
RTN4R-205ENST00000469601 CNTN3Q9P232 1028 aa23.26■■□□□ 1.31
RTN4R-205ENST00000469601 HNRNPDLO14979 420 aaKnown RBP23.25■■□□□ 1.31
RTN4R-205ENST00000469601 UPP1Q16831 310 aa23.25■■□□□ 1.31
RTN4R-205ENST00000469601 RTP2Q5QGT7 225 aa23.25■■□□□ 1.31
RTN4R-205ENST00000469601 SV2BQ7L1I2 683 aa23.25■■□□□ 1.31
RTN4R-205ENST00000469601 RHOBTB2Q9BYZ6 727 aa23.25■■□□□ 1.31
RTN4R-205ENST00000469601 C11orf16Q9NQ32 467 aa23.25■■□□□ 1.31
RTN4R-205ENST00000469601 USTQ9Y2C2 406 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms