RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 EXOC3O60645 756 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 OFD1O75665 1012 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 DGKIO75912 1065 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 AMHP03971 560 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 ITGA4P13612 1032 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 PAX3P23760 479 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 SPAG1Q07617 926 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 NAB2Q15742 525 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 C15orf39Q6ZRI6 1047 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 CBWD2Q8IUF1 395 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 CEP120Q8N960 986 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
MSH5-214ENST00000468602 SRRTQ9BXP5 876 aaKnown RBP12.25□□□□□ -0.45
MSH5-214ENST00000468602 TMEM117Q9H0C3 514 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 NXF3Q9H4D5 531 aaKnown RBP12.25□□□□□ -0.45
MSH5-214ENST00000468602 RPF1Q9H9Y2 349 aaKnown RBP12.25□□□□□ -0.45
MSH5-214ENST00000468602 RSAD1Q9HA92 442 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 CBX8Q9HC52 389 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 FNDC1Q4ZHG4 1894 aaPredicted RBP12.25□□□□□ -0.45
MSH5-214ENST00000468602 TRIP11Q15643 1979 aa12.25□□□□□ -0.45
MSH5-214ENST00000468602 P4HA2O15460 535 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 RECQL4O94761 1208 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 GJB5O95377 273 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 EPB41P11171 864 aaKnown RBP12.24□□□□□ -0.45
MSH5-214ENST00000468602 SYN1P17600 705 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 TNFSF9P41273 254 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 CASP4P49662 377 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 YARSP54577 528 aaKnown RBP12.24□□□□□ -0.45
MSH5-214ENST00000468602 DSC1Q08554 894 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 BFSP1Q12934 665 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 ZBTB41Q5SVQ8 909 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 CDR2LQ86X02 465 aaPredicted RBP12.24□□□□□ -0.45
MSH5-214ENST00000468602 WDR49Q8IV35 697 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 TMEM192Q8IY95 271 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 FAM186BQ8IYM0 893 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 THNSL1Q8IYQ7 743 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 ZSWIM2Q8NEG5 633 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 FAXDC2Q96IV6 333 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 PPP1R10Q96QC0 940 aaKnown RBP12.24□□□□□ -0.45
MSH5-214ENST00000468602 FAM213AQ9BRX8 229 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 MRPL9Q9BYD2 267 aaKnown RBP12.24□□□□□ -0.45
MSH5-214ENST00000468602 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 SNTG2Q9NY99 539 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 RBAKQ9NYW8 714 aaPredicted RBP12.24□□□□□ -0.45
MSH5-214ENST00000468602 LIMA1Q9UHB6 759 aaKnown RBP12.24□□□□□ -0.45
MSH5-214ENST00000468602 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
MSH5-214ENST00000468602 COQ4Q9Y3A0 265 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 PCDHB7Q9Y5E2 793 aa12.24□□□□□ -0.45
MSH5-214ENST00000468602 SMIM28A0A1B0GU29 152 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 GTPBP10A4D1E9 387 aaKnown RBP12.23□□□□□ -0.45
MSH5-214ENST00000468602 ARL5CA6NH57 179 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 H0YGN5 161 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 PTGESO14684 152 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 STX10O60499 249 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 STAU1O95793 577 aaKnown RBP12.23□□□□□ -0.45
MSH5-214ENST00000468602 ACRP10323 421 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 LRPAP1P30533 357 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 KCNJ6P48051 423 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 ACOT2P49753 483 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 CYP2J2P51589 502 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 STX17P56962 302 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 GRIK3Q13003 919 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 TMEM132AQ24JP5 1023 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 CLLU1OSQ5K130 101 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 C1orf220Q5T0J3 134 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 GLB1LQ6UWU2 654 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.23□□□□□ -0.45
MSH5-214ENST00000468602 APTXQ7Z2E3 356 aaKnown RBP12.23□□□□□ -0.45
MSH5-214ENST00000468602 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 CMTR2Q8IYT2 770 aaKnown RBP12.23□□□□□ -0.45
MSH5-214ENST00000468602 CXorf38Q8TB03 319 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 PLEKHO2Q8TD55 490 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 SLC35C1Q96A29 364 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 SAAL1Q96ER3 474 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 CASD1Q96PB1 797 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 CGRRF1Q99675 332 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 PCIF1Q9H4Z3 704 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 SLC38A7Q9NVC3 462 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 FANCLQ9NW38 375 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 ARMCX3Q9UH62 379 aaPredicted RBP12.23□□□□□ -0.45
MSH5-214ENST00000468602 HES2Q9Y543 173 aa12.23□□□□□ -0.45
MSH5-214ENST00000468602 RANBP2P49792 3224 aaKnown RBP12.23□□□□□ -0.45
MSH5-214ENST00000468602 LACTBL1A8MY62 500 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 TMEM189-UBE2V1I3L0A0 370 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 XPOTO43592 962 aaKnown RBP12.22□□□□□ -0.45
MSH5-214ENST00000468602 CXCL8P10145 99 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 MATR3P43243 847 aaKnown RBP eCLIP12.22□□□□□ -0.45
MSH5-214ENST00000468602 VAMP7P51809 220 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 UVSSAQ2YD98 709 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 TCP11X2Q5H9J9 407 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 OTOP2Q7RTS6 562 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 AOPEPQ8N6M6 819 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
MSH5-214ENST00000468602 UROC1Q96N76 676 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 FAM124BQ9H5Z6 455 aaPredicted RBP12.22□□□□□ -0.45
MSH5-214ENST00000468602 VRTNQ9H8Y1 702 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 SAMSN1Q9NSI8 373 aaKnown RBP12.22□□□□□ -0.45
MSH5-214ENST00000468602 INTS13Q9NVM9 706 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 CXXC1Q9P0U4 656 aaPredicted RBP12.22□□□□□ -0.45
MSH5-214ENST00000468602 UBQLN1Q9UMX0 589 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms