RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CTNNBL1Q8WYA6 563 aaPredicted RBP10.98□□□□□ -0.65
MSH5-213ENST00000468136 TRIM11Q96F44 468 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 ANKRD36BP1Q96IX9 119 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 NLRP4Q96MN2 994 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 ADPGKQ9BRR6 497 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 CARD6Q9BX69 1037 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 IRX2Q9BZI1 471 aaPredicted RBP10.98□□□□□ -0.65
MSH5-213ENST00000468136 ASB7Q9H672 318 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 SPC25Q9HBM1 224 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 ANKFY1Q9P2R3 1169 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 CPSF3Q9UKF6 684 aaKnown RBP10.98□□□□□ -0.65
MSH5-213ENST00000468136 GJD2Q9UKL4 321 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 SNX12Q9UMY4 172 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 AKT3Q9Y243 479 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 CNTNAP2Q9UHC6 1331 aa10.98□□□□□ -0.65
MSH5-213ENST00000468136 MBLAC1A4D2B0 266 aaPredicted RBP10.97□□□□□ -0.65
MSH5-213ENST00000468136 RCCD1A6NED2 376 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 DDX3XO00571 662 aaKnown RBP eCLIP10.97□□□□□ -0.65
MSH5-213ENST00000468136 DYNC1LI2O43237 492 aaPredicted RBP10.97□□□□□ -0.65
MSH5-213ENST00000468136 PHACTR2O75167 634 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 RTN2O75298 545 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 DUSP11O75319 330 aaKnown RBP10.97□□□□□ -0.65
MSH5-213ENST00000468136 HLA-DRAP01903 254 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 TNNC2P02585 160 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 PIK3CAP42336 1068 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 PAFAH1B1P43034 410 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 NKX3-2P78367 333 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 DRP2Q13474 957 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 BIRC3Q13489 604 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 ARHGAP44Q17R89 818 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 TMEM132AQ24JP5 1023 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 SGSM1Q2NKQ1 1148 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 ZNF568Q3ZCX4 644 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 RSRC2Q7L4I2 434 aaKnown RBP10.97□□□□□ -0.65
MSH5-213ENST00000468136 ZNF572Q7Z3I7 529 aaPredicted RBP10.97□□□□□ -0.65
MSH5-213ENST00000468136 TLK2Q86UE8 772 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 TAS1R2Q8TE23 839 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 RFFLQ8WZ73 363 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 GCOM2Q9BZD3 368 aaPredicted RBP10.97□□□□□ -0.65
MSH5-213ENST00000468136 ISCUQ9H1K1 167 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 RPF1Q9H9Y2 349 aaKnown RBP10.97□□□□□ -0.65
MSH5-213ENST00000468136 LCMT1Q9UIC8 334 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 PCDHB2Q9Y5E7 798 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 NCANO14594 1321 aa10.97□□□□□ -0.65
MSH5-213ENST00000468136 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.96□□□□□ -0.65
MSH5-213ENST00000468136 GRID2IPA4D2P6 1211 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 HAS3O00219 553 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 ABLIM1O14639 778 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 FANCGO15287 622 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 FAM189A1O60320 539 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 ERLIN2O94905 339 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 MYBL1P10243 752 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 ATICP31939 592 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 ACOT2P49753 483 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 CLCN3P51790 818 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 CDR2Q01850 454 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 APBA1Q02410 837 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 NFRKBQ6P4R8 1299 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 GJB7Q6PEY0 223 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 ARHGEF19Q8IW93 802 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 EPS8L1Q8TE68 723 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 U2AF1L4Q8WU68 220 aaKnown RBP10.96□□□□□ -0.65
MSH5-213ENST00000468136 SEMA4DQ92854 862 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 PBKQ96KB5 322 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 KREMEN1Q96MU8 473 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 CFHR5Q9BXR6 569 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 PLEKHA5Q9HAU0 1116 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 IFT122Q9HBG6 1241 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 GPBP1L1Q9HC44 474 aaPredicted RBP10.96□□□□□ -0.65
MSH5-213ENST00000468136 PDE11AQ9HCR9 933 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 TRIM10Q9UDY6 481 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 ABT1Q9ULW3 272 aaKnown RBP10.96□□□□□ -0.65
MSH5-213ENST00000468136 CNTN6Q9UQ52 1028 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 DERAQ9Y315 318 aa10.96□□□□□ -0.65
MSH5-213ENST00000468136 A0A0U1RQJ8 604 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 TULP1O00294 542 aaPredicted RBP10.95□□□□□ -0.66
MSH5-213ENST00000468136 ATP8B1O43520 1251 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 LRRN2O75325 713 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 CAPN15O75808 1086 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 MTA2O94776 668 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 MOCS3O95396 460 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 TMEM191BP0C7N4 346 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 ZNF286BP0CG31 522 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 P4HA1P13674 534 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 CYP11B1P15538 503 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 HOXD10P28358 340 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 NOP2P46087 812 aaKnown RBP10.95□□□□□ -0.66
MSH5-213ENST00000468136 PSEN2P49810 448 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 GPC5P78333 572 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 CRHR2Q13324 411 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 TRPC3Q13507 836 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 CUL2Q13617 745 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 NCOA4Q13772 614 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 MFSD10Q14728 455 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 ENOX2Q16206 610 aaKnown RBP10.95□□□□□ -0.66
MSH5-213ENST00000468136 CFAP221Q4G0U5 840 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 TDRD10Q5VZ19 366 aaKnown RBP10.95□□□□□ -0.66
MSH5-213ENST00000468136 TAF2Q6P1X5 1199 aa10.95□□□□□ -0.66
MSH5-213ENST00000468136 FAM43BQ6ZT52 329 aaPredicted RBP10.95□□□□□ -0.66
MSH5-213ENST00000468136 SLFN11Q7Z7L1 901 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 262.3 ms