RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-205ENST00000466416 B4GALNT3Q6L9W6 998 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 MIER3Q7Z3K6 550 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 MICU3Q86XE3 530 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 CEP57Q86XR8 500 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 GSTCDQ8NEC7 633 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 DEPDC1BQ8WUY9 529 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 GAB3Q8WWW8 586 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 PSPC1Q8WXF1 523 aaKnown RBP10.28□□□□□ -0.76
ABCF3-205ENST00000466416 SLC7A3Q8WY07 619 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 ZCCHC14Q8WYQ9 949 aaKnown RBP10.28□□□□□ -0.76
ABCF3-205ENST00000466416 SLC5A5Q92911 643 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 SH2D3AQ9BRG2 576 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 EIF2AQ9BY44 585 aaKnown RBP10.28□□□□□ -0.76
ABCF3-205ENST00000466416 CSRNP2Q9H175 543 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 UNC45AQ9H3U1 944 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 C6orf50Q9HD87 102 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 HES2Q9Y543 173 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 PPME1Q9Y570 386 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 GREB1Q4ZG55 1949 aa10.28□□□□□ -0.76
ABCF3-205ENST00000466416 ZMYM2Q9UBW7 1377 aa10.27□□□□□ -0.76
ABCF3-205ENST00000466416 ESYT2A0FGR8 921 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 TMEM150BA6NC51 233 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 ZNF263O14978 683 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 ADAM12O43184 909 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 RPP40O75818 363 aaKnown RBP10.27□□□□□ -0.77
ABCF3-205ENST00000466416 CEACAM1P13688 526 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 CEBPBP17676 345 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 OR1D2P34982 312 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 LAMTOR4Q0VGL1 99 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 SLC5A9Q2M3M2 681 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 FAM78AQ5JUQ0 283 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 ERICH6BQ5W0A0 696 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 POTEHQ6S545 545 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 REXO1Q8N1G1 1221 aaKnown RBP10.27□□□□□ -0.77
ABCF3-205ENST00000466416 SYNPOQ8N3V7 929 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 CCDC12Q8WUD4 166 aaPredicted RBP10.27□□□□□ -0.77
ABCF3-205ENST00000466416 ZC3H10Q96K80 434 aaKnown RBP10.27□□□□□ -0.77
ABCF3-205ENST00000466416 ASB16Q96NS5 453 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 SCNM1Q9BWG6 230 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 APOL6Q9BWW8 343 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 TRIM6Q9C030 488 aaPredicted RBP10.27□□□□□ -0.77
ABCF3-205ENST00000466416 ZMYND12Q9H0C1 365 aa10.27□□□□□ -0.77
ABCF3-205ENST00000466416 C8orf33Q9H7E9 229 aaPredicted RBP10.27□□□□□ -0.77
ABCF3-205ENST00000466416 NOTCH4Q99466 2003 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 GIPC1O14908 333 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 PSMD10O75832 226 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 AKAP3O75969 853 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 SPINK2P20155 84 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 CSRP1P21291 193 aaKnown RBP10.26□□□□□ -0.77
ABCF3-205ENST00000466416 GNA11P29992 359 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 MPLP40238 635 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 USP11P51784 963 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 PSMC5P62195 406 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 NUCB1Q02818 461 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 TUSC3Q13454 348 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 VITQ6UXI7 678 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 ANO5Q75V66 913 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 KBTBD6Q86V97 674 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 MFSD6LQ8IWD5 586 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 RNF149Q8NC42 400 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 CSGALNACT1Q8TDX6 532 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 TCP11Q8WWU5 503 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 RABGGTAQ92696 567 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 SMARCD2Q92925 531 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 E2F7Q96AV8 911 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 CCDC136Q96JN2 1154 aa10.26□□□□□ -0.77
ABCF3-205ENST00000466416 RWDD1Q9H446 243 aaPredicted RBP10.26□□□□□ -0.77
ABCF3-205ENST00000466416 WDR81Q562E7 1941 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 ARHGEF37A1IGU5 675 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 WDR27A2RRH5 827 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 C4orf47A7E2U8 309 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 TSPAN1O60635 241 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 DKC1O60832 514 aaKnown RBP eCLIP10.25□□□□□ -0.77
ABCF3-205ENST00000466416 LRG1P02750 347 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 AKAP5P24588 427 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 CHMLP26374 656 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 RFC5P40937 340 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 RBM25P49756 843 aaKnown RBP10.25□□□□□ -0.77
ABCF3-205ENST00000466416 POU5F1BQ06416 359 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 RTN1Q16799 776 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 PFKFB3Q16875 520 aaPredicted RBP10.25□□□□□ -0.77
ABCF3-205ENST00000466416 PRSS36Q5K4E3 855 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 SH3PXD2AQ5TCZ1 1133 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 APOA5Q6Q788 366 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 B3GNT9Q6UX72 402 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.25□□□□□ -0.77
ABCF3-205ENST00000466416 BICD2Q8TD16 824 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 TMEM143Q96AN5 459 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 CPB2Q96IY4 423 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 EDEM2Q9BV94 578 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 DHX33Q9H6R0 707 aaKnown RBP10.25□□□□□ -0.77
ABCF3-205ENST00000466416 TRPV4Q9HBA0 871 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 RBM12Q9NTZ6 932 aaKnown RBP10.25□□□□□ -0.77
ABCF3-205ENST00000466416 ANKFY1Q9P2R3 1169 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 MTRRQ9UBK8 725 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 NEUROG3Q9Y4Z2 214 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 RBM8AQ9Y5S9 174 aaKnown RBP10.25□□□□□ -0.77
ABCF3-205ENST00000466416 BACE2Q9Y5Z0 518 aa10.25□□□□□ -0.77
ABCF3-205ENST00000466416 SPAG17Q6Q759 2223 aa10.24□□□□□ -0.77
ABCF3-205ENST00000466416 ARNTLO00327 626 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms