RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 ERLIN1O75477 346 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 TOM1L1O75674 476 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 ZNF157P51786 506 aaPredicted RBP19.68■□□□□ 0.74
COL9A3-205ENST00000466192 MAPK6Q16659 721 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 ZNF484Q5JVG2 852 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 TDRD10Q5VZ19 366 aaKnown RBP19.68■□□□□ 0.74
COL9A3-205ENST00000466192 NLRP4Q96MN2 994 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 C16orf70Q9BSU1 422 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 C2orf40Q9H1Z8 148 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 TAS2R14Q9NYV8 317 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 ANK1P16157 1881 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 CNTNAP2Q9UHC6 1331 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 SLC15A5A6NIM6 579 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 CYP26A1O43174 497 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 ATP8B1O43520 1251 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 SGPL1O95470 568 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 TUBBP07437 444 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 PAFAH1B1P43034 410 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 ACVR2BQ13705 512 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 IFI16Q16666 785 aaKnown RBP19.68■□□□□ 0.74
COL9A3-205ENST00000466192 DUSP28Q4G0W2 176 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 WDR93Q6P2C0 686 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 ZBTB33Q86T24 672 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 ABHD16BQ9H3Z7 469 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 ACP6Q9NPH0 428 aa19.68■□□□□ 0.74
COL9A3-205ENST00000466192 ABLIM1O14639 778 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 ADCY6O43306 1168 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 TNFSF9P41273 254 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 PLA2G4AP47712 749 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 PTPROQ16827 1216 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 CHADLQ6NUI6 762 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 ZNF572Q7Z3I7 529 aaPredicted RBP19.67■□□□□ 0.74
COL9A3-205ENST00000466192 EPS8L1Q8TE68 723 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 NOCTQ9UK39 431 aaKnown RBP19.67■□□□□ 0.74
COL9A3-205ENST00000466192 PPFIA4O75335 1185 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 ZMYND10O75800 440 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 ABCB4P21439 1286 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 TFDP1Q14186 410 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 NOP9Q86U38 636 aaKnown RBP19.67■□□□□ 0.74
COL9A3-205ENST00000466192 SLC47A2Q86VL8 602 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 LRRC57Q8N9N7 239 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 TPCN2Q8NHX9 752 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 DHX38Q92620 1227 aaKnown RBP19.67■□□□□ 0.74
COL9A3-205ENST00000466192 TCHPQ9BT92 498 aa19.67■□□□□ 0.74
COL9A3-205ENST00000466192 A0A0A6YYK5 440 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-205ENST00000466192 ZC3H11AO75152 810 aaKnown RBP eCLIP19.66■□□□□ 0.744e-8■■□□□ 14.3
COL9A3-205ENST00000466192 VNN1O95497 513 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 HLA-DRAP01903 254 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 PTENP60484 403 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 CFAP221Q4G0U5 840 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 RPUSD2Q8IZ73 545 aaKnown RBP19.66■□□□□ 0.74
COL9A3-205ENST00000466192 CGRRF1Q99675 332 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 FZD8Q9H461 694 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 MINDY3Q9H8M7 445 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 INO80B-WBP1J3KQ70 363 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 CHRNB2P17787 502 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 GCNT1Q02742 428 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 ITIH3Q06033 890 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 BIRC3Q13489 604 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 MORN1Q5T089 497 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 LINC01465Q8N7H1 131 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 OR5B17Q8NGF7 314 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 HINFPQ9BQA5 517 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 INO80BQ9C086 356 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-205ENST00000466192 ST7Q9NRC1 585 aa19.66■□□□□ 0.74
COL9A3-205ENST00000466192 TARSL2A2RTX5 802 aaKnown RBP19.65■□□□□ 0.74
COL9A3-205ENST00000466192 H3BRB1 525 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 ACKR2O00590 384 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 ASAP2O43150 1006 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 B4GALT5O43286 388 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 IQCF3P0C7M6 154 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 TMEM253P0C7T8 217 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 PIK3CAP42336 1068 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 MBTD1Q05BQ5 628 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 MCL1Q07820 350 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 TAF1CQ15572 869 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-205ENST00000466192 BRSK2Q8IWQ3 736 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 MMGT1Q8N4V1 131 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 TUT1Q9H6E5 874 aaKnown RBP19.65■□□□□ 0.74
COL9A3-205ENST00000466192 OSGEPQ9NPF4 335 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 C1orf112Q9NSG2 853 aa19.65■□□□□ 0.74
COL9A3-205ENST00000466192 MANSC4A6NHS7 340 aaPredicted RBP19.64■□□□□ 0.74
COL9A3-205ENST00000466192 MMP3P08254 477 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 HOXD8P13378 290 aaPredicted RBP19.64■□□□□ 0.74
COL9A3-205ENST00000466192 PROZP22891 400 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 MRPS25P82663 173 aaKnown RBP19.64■□□□□ 0.74
COL9A3-205ENST00000466192 RPS6KA1Q15418 735 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 TAF3Q5VWG9 929 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 IQSEC1Q6DN90 963 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 TSHZ1Q6ZSZ6 1077 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 OR6J1Q8NGC5 347 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 CTNNBL1Q8WYA6 563 aaPredicted RBP19.64■□□□□ 0.74
COL9A3-205ENST00000466192 PCDHB18PQ96TA0 734 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 LRRC1Q9BTT6 524 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 IFT122Q9HBG6 1241 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 PTPRHQ9HD43 1115 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 RBM12Q9NTZ6 932 aaKnown RBP19.64■□□□□ 0.74
COL9A3-205ENST00000466192 L1RE1Q9UN81 338 aa19.64■□□□□ 0.74
COL9A3-205ENST00000466192 NCANO14594 1321 aa19.64■□□□□ 0.73
COL9A3-205ENST00000466192 OGTO15294 1046 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms