RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PSPC1Q8WXF1 523 aaKnown RBP21.06■□□□□ 0.96
SDF4-205ENST00000465727 QTRT2Q9H974 415 aaKnown RBP21.06■□□□□ 0.96
SDF4-205ENST00000465727 ETAA1Q9NY74 926 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 KCND2Q9NZV8 630 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 ANAPC5Q9UJX4 755 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 CHKBQ9Y259 395 aa21.06■□□□□ 0.96
SDF4-205ENST00000465727 SFI1A8K8P3 1242 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 MSH4O15457 936 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 ASMTLO95671 621 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 ABHD2P08910 425 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 CNGA1P29973 690 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 KLC1Q07866 573 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 FAM178BQ8IXR5 827 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 ZBTB10Q96DT7 871 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 FIZ1Q96SL8 496 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 POP1Q99575 1024 aaKnown RBP21.05■□□□□ 0.96
SDF4-205ENST00000465727 BCAS3Q9H6U6 928 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 SERPINB13Q9UIV8 391 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 PHTF1Q9UMS5 762 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 RASA4BC9J798 803 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 FAM86B1E9PN63 330 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 CLDN3O15551 220 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 RASA4O43374 803 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 EXOC3O60645 756 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 FAM86B2P0C5J1 330 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 TARSP26639 723 aaKnown RBP21.05■□□□□ 0.96
SDF4-205ENST00000465727 PAPOLAP51003 745 aaKnown RBP21.05■□□□□ 0.96
SDF4-205ENST00000465727 EPS8L1Q8TE68 723 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 TBC1D10AQ9BXI6 508 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 FOXP3Q9BZS1 431 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 IKZF4Q9H2S9 585 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 DCLRE1BQ9H816 532 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 USP20Q9Y2K6 914 aa21.05■□□□□ 0.96
SDF4-205ENST00000465727 MROH7Q68CQ1 1323 aa21.04■□□□□ 0.96
SDF4-205ENST00000465727 PRPF4O43172 522 aaKnown RBP eCLIP21.04■□□□□ 0.961e-6■□□□□ 10.2
SDF4-205ENST00000465727 MXRA7P84157 204 aa21.04■□□□□ 0.96
SDF4-205ENST00000465727 ROR2Q01974 943 aaKnown RBP21.04■□□□□ 0.96
SDF4-205ENST00000465727 C1orf54Q8WWF1 131 aa21.04■□□□□ 0.96
SDF4-205ENST00000465727 DNAJC9Q8WXX5 260 aa21.04■□□□□ 0.96
SDF4-205ENST00000465727 TLE6Q9H808 572 aa21.04■□□□□ 0.96
SDF4-205ENST00000465727 HAO1Q9UJM8 370 aa21.04■□□□□ 0.96
SDF4-205ENST00000465727 NOCTQ9UK39 431 aaKnown RBP21.04■□□□□ 0.96
SDF4-205ENST00000465727 ZMYND8Q9ULU4 1186 aaPredicted RBP21.04■□□□□ 0.96
SDF4-205ENST00000465727 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.04■□□□□ 0.96
SDF4-205ENST00000465727 HGSO14964 777 aaPredicted RBP21.03■□□□□ 0.96
SDF4-205ENST00000465727 SMIM24O75264 130 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 MUTP22033 750 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 PTDSS1P48651 473 aaKnown RBP21.03■□□□□ 0.96
SDF4-205ENST00000465727 WDR4P57081 412 aaKnown RBP21.03■□□□□ 0.96
SDF4-205ENST00000465727 SPARCL1Q14515 664 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 MFSD14BQ5SR56 506 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 FAM47EQ6ZV65 393 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 RBBP8NLQ8NC74 664 aaPredicted RBP21.03■□□□□ 0.96
SDF4-205ENST00000465727 SLC7A6OSQ96CW6 309 aaPredicted RBP21.03■□□□□ 0.96
SDF4-205ENST00000465727 PCDHB18PQ96TA0 734 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 HSD17B14Q9BPX1 270 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 KIAA1683Q9H0B3 1180 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 VCXQ9H320 206 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 PAPOLBQ9NRJ5 636 aaKnown RBP21.03■□□□□ 0.96
SDF4-205ENST00000465727 SENP1Q9P0U3 644 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 TBK1Q9UHD2 729 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 ASB3Q9Y575 518 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 A0A1W2PRG0 241 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 CETPP11597 493 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 EPC2Q52LR7 807 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 TMEM63BQ5T3F8 832 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 THEMIS2Q5TEJ8 643 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 ZNF746Q6NUN9 644 aaPredicted RBP21.03■□□□□ 0.96
SDF4-205ENST00000465727 LONP2Q86WA8 852 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 CNBD1Q8NA66 436 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 ATL2Q8NHH9 583 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 TMEM174Q8WUU8 243 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 DCAF4Q8WV16 495 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 ZFAND2BQ8WV99 257 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 MAML1Q92585 1016 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 LNPEPQ9UIQ6 1025 aa21.03■□□□□ 0.96
SDF4-205ENST00000465727 SMG5Q9UPR3 1016 aaKnown RBP21.03■□□□□ 0.96
SDF4-205ENST00000465727 CHRNB2P17787 502 aa21.02■□□□□ 0.96
SDF4-205ENST00000465727 GM2AP17900 193 aa21.02■□□□□ 0.96
SDF4-205ENST00000465727 CENPCQ03188 943 aa21.02■□□□□ 0.96
SDF4-205ENST00000465727 NFIXQ14938 502 aa21.02■□□□□ 0.96
SDF4-205ENST00000465727 CWF19L1Q69YN2 538 aaKnown RBP21.02■□□□□ 0.96
SDF4-205ENST00000465727 ARHGEF19Q8IW93 802 aa21.02■□□□□ 0.96
SDF4-205ENST00000465727 FAM71AQ8IYT1 594 aa21.02■□□□□ 0.96
SDF4-205ENST00000465727 MARCH10Q8NA82 808 aaPredicted RBP21.02■□□□□ 0.96
SDF4-205ENST00000465727 ZNF653Q96CK0 615 aa21.02■□□□□ 0.96
SDF4-205ENST00000465727 SAR1AQ9NR31 198 aa21.02■□□□□ 0.96
SDF4-205ENST00000465727 STOML1Q9UBI4 398 aa21.02■□□□□ 0.96
SDF4-205ENST00000465727 TAF1LQ8IZX4 1826 aa21.02■□□□□ 0.96
SDF4-205ENST00000465727 LOXHD1Q8IVV2 1947 aa21.02■□□□□ 0.95
SDF4-205ENST00000465727 MYH11P35749 1972 aa21.02■□□□□ 0.95
SDF4-205ENST00000465727 FOXO6A8MYZ6 492 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 EDF1O60869 148 aaKnown RBP21.01■□□□□ 0.95
SDF4-205ENST00000465727 POLD1P28340 1107 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 PTPN4P29074 926 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 ADCY8P40145 1251 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 PDK4Q16654 411 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 IRGCQ6NXR0 463 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 TDRPQ86YL5 185 aa21.01■□□□□ 0.95
SDF4-205ENST00000465727 CCDC89Q8N998 374 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms