RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 FAM26FQ5R3K3 315 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 KIAA1841Q6NSI8 718 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 TTI2Q6NXR4 508 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 POTEGQ6S5H5 508 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 MTHFD1LQ6UB35 978 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 SLC24A5Q71RS6 500 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 FAM228AQ86W67 206 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 SIX5Q8N196 739 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 KIAA1524Q8TCG1 905 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 GJA10Q969M2 543 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 DNAJC19Q96DA6 116 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 NACC1Q96RE7 527 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 KCNF1Q9H3M0 494 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 AGO4Q9HCK5 861 aaKnown RBP15.14■□□□□ 0.01
HDAC6-215ENST00000465457 NGRNQ9NPE2 291 aaKnown RBP15.14■□□□□ 0.01
HDAC6-215ENST00000465457 KCNH7Q9NS40 1196 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 PANK4Q9NVE7 773 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 DBR1Q9UK59 544 aaKnown RBP15.14■□□□□ 0.01
HDAC6-215ENST00000465457 ITIH6Q6UXX5 1313 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 CHD6Q8TD26 2715 aa15.14■□□□□ 0.01
HDAC6-215ENST00000465457 MYH9P35579 1960 aaKnown RBP15.13■□□□□ 0.01
HDAC6-215ENST00000465457 SMIM35A0A1B0GVV1 85 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 KCNJ18B7U540 433 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 E9PMD0 336 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 EOMESO95936 686 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 TPM1P09493 284 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 GAP43P17677 238 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 SFNP31947 248 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 CA8P35219 290 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 MTHFRP42898 656 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 JAK3P52333 1124 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 STK4Q13043 487 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 KCNJ12Q14500 433 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 NR1I3Q14994 352 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 CENPPQ6IPU0 288 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 TMC5Q6UXY8 1006 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-215ENST00000465457 DYMQ7RTS9 669 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 TMEM173Q86WV6 379 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-215ENST00000465457 CSGALNACT2Q8N6G5 542 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 MRPL43Q8N983 215 aaKnown RBP15.13■□□□□ 0.01
HDAC6-215ENST00000465457 KIAA0895Q8NCT3 520 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 OSMRQ99650 979 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 ATP6V0A4Q9HBG4 840 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 C1orf112Q9NSG2 853 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 SPTLC3Q9NUV7 552 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 TMEM161AQ9NX61 479 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 DLL3Q9NYJ7 618 aa15.13■□□□□ 0.01
HDAC6-215ENST00000465457 MIA3Q5JRA6 1907 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 NT5C1B-RDH14C9J2C7 533 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 TBCAO75347 108 aaKnown RBP15.12■□□□□ 0.01
HDAC6-215ENST00000465457 DSC3Q14574 896 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 PUM1Q14671 1186 aaKnown RBP eCLIP15.12■□□□□ 0.01
HDAC6-215ENST00000465457 SMC1AQ14683 1233 aaKnown RBP15.12■□□□□ 0.01
HDAC6-215ENST00000465457 KIZQ2M2Z5 673 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 CLLU1OSQ5K130 101 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 APTXQ7Z2E3 356 aaKnown RBP15.12■□□□□ 0.01
HDAC6-215ENST00000465457 KIAA0319LQ8IZA0 1049 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 SLC39A11Q8N1S5 342 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 CACTINQ8WUQ7 758 aaKnown RBP15.12■□□□□ 0.01
HDAC6-215ENST00000465457 ZNF558Q96NG5 402 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 NAP1L5Q96NT1 182 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-215ENST00000465457 HINFPQ9BQA5 517 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 UNC45AQ9H3U1 944 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 JPH1Q9HDC5 661 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-215ENST00000465457 RTN4Q9NQC3 1192 aaKnown RBP15.12■□□□□ 0.01
HDAC6-215ENST00000465457 SEL1LQ9UBV2 794 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 PUF60Q9UHX1 559 aaKnown RBP15.12■□□□□ 0.01
HDAC6-215ENST00000465457 DUSP12Q9UNI6 340 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 COL4A3BPQ9Y5P4 624 aa15.12■□□□□ 0.01
HDAC6-215ENST00000465457 PATJQ8NI35 1801 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 KRBA1A5PL33 1030 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 EML1O00423 815 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 DKC1O60832 514 aaKnown RBP eCLIP15.11■□□□□ 0.01
HDAC6-215ENST00000465457 LYPLA2O95372 231 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 RPLP2P05387 115 aaKnown RBP15.11■□□□□ 0.01
HDAC6-215ENST00000465457 KLRC1P26715 233 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 KRT31Q15323 416 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 STXBP4Q6ZWJ1 553 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 MIER3Q7Z3K6 550 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 LRRC43Q8N309 656 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 IQCDQ96DY2 449 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 ZNF830Q96NB3 372 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-215ENST00000465457 TIPINQ9BVW5 301 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 TMEM117Q9H0C3 514 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 ZSWIM4Q9H7M6 989 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 SLC39A2Q9NP94 309 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 CYP26B1Q9NR63 512 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 INTS13Q9NVM9 706 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 FBXL21Q9UKT6 434 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 ODF2LQ9ULJ1 636 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 MAPK8IP1Q9UQF2 711 aa15.11■□□□□ 0.01
HDAC6-215ENST00000465457 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.11■□□□□ 0.016e-9■■■□□ 15.2
HDAC6-215ENST00000465457 BAHCC1Q9P281 2608 aa15.1■□□□□ 0.01
HDAC6-215ENST00000465457 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.1■□□□□ 0.01
HDAC6-215ENST00000465457 WDR64B1ANS9 1081 aa15.1■□□□□ 0.01
HDAC6-215ENST00000465457 N4BP3O15049 544 aa15.1■□□□□ 0.01
HDAC6-215ENST00000465457 CCP110O43303 1012 aa15.1■□□□□ 0.01
HDAC6-215ENST00000465457 CHMP2AO43633 222 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms