RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 LIG4P49917 911 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 ZP2Q05996 745 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 TPRNQ4KMQ1 711 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 CES5AQ6NT32 575 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 FUT10Q6P4F1 479 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 SPATA31D4Q6ZUB0 917 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 SV2BQ7L1I2 683 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 PALB2Q86YC2 1186 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 ADHFE1Q8IWW8 467 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 RIN2Q8WYP3 895 aaPredicted RBP13.35□□□□□ -0.27
XRN1-204ENST00000465074 KHSRPQ92945 711 aaKnown RBP eCLIP13.35□□□□□ -0.27
XRN1-204ENST00000465074 POP1Q99575 1024 aaKnown RBP13.35□□□□□ -0.27
XRN1-204ENST00000465074 HERC2P3Q9BVR0 1158 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 GPR62Q9BZJ7 368 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 EPHX3Q9H6B9 360 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 GOLGA2P5Q9HBQ8 144 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 TSHZ2Q9NRE2 1034 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 TOPORSQ9NS56 1045 aaPredicted RBP13.35□□□□□ -0.27
XRN1-204ENST00000465074 STK39Q9UEW8 545 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 PRKAG3Q9UGI9 489 aa13.35□□□□□ -0.27
XRN1-204ENST00000465074 CITO14578 2027 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 KIF4AO95239 1232 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 F13A1P00488 732 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 MCF2P10911 925 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 IDEP14735 1019 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 HOXB8P17481 243 aaPredicted RBP13.34□□□□□ -0.27
XRN1-204ENST00000465074 RPL17P18621 184 aaKnown RBP13.34□□□□□ -0.27
XRN1-204ENST00000465074 NASPP49321 788 aaPredicted RBP13.34□□□□□ -0.27
XRN1-204ENST00000465074 NCKAP1LP55160 1127 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 KCNC3Q14003 757 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 NOLC1Q14978 699 aaKnown RBP eCLIP13.34□□□□□ -0.27
XRN1-204ENST00000465074 USP41Q3LFD5 358 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 ZC2HC1CQ53FD0 456 aaPredicted RBP13.34□□□□□ -0.27
XRN1-204ENST00000465074 FAM171A1Q5VUB5 890 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 SYCE2Q6PIF2 218 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 PRSS55Q6UWB4 352 aaPredicted RBP13.34□□□□□ -0.27
XRN1-204ENST00000465074 TMEM184AQ6ZMB5 413 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 PPFIBP1Q86W92 1011 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 LINC00301Q8NCQ3 95 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 SLC22A17Q8WUG5 538 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 STAMQ92783 540 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 FAM212AQ96EL1 285 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 PTPRHQ9HD43 1115 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 TBC1D7Q9P0N9 293 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 STK17AQ9UEE5 414 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 TBX20Q9UMR3 447 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 SSX2IPQ9Y2D8 614 aa13.34□□□□□ -0.27
XRN1-204ENST00000465074 PLXNA3P51805 1871 aa13.33□□□□□ -0.27
XRN1-204ENST00000465074 ZMYM2Q9UBW7 1377 aa13.33□□□□□ -0.27
XRN1-204ENST00000465074 SMIM28A0A1B0GU29 152 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 I3L4J1 428 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 HNRNPDLO14979 420 aaKnown RBP13.33□□□□□ -0.28
XRN1-204ENST00000465074 TEX28O15482 410 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 TOM1L1O75674 476 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 B3GAT3O94766 335 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 ADH1AP07327 375 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 CLCNKBP51801 687 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 SPAG1Q07617 926 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 PKP1Q13835 747 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 CBX2Q14781 532 aaPredicted RBP13.33□□□□□ -0.28
XRN1-204ENST00000465074 KIAA0319Q5VV43 1072 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 TMC5Q6UXY8 1006 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 ZPBP2Q6X784 338 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 SFR1Q86XK3 245 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 DDX12PQ92771 950 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 S1PR5Q9H228 398 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 IRAK3Q9Y616 596 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 NCOR1O75376 2440 aa13.33□□□□□ -0.28
XRN1-204ENST00000465074 SF3B1O75533 1304 aaKnown RBP eCLIP13.33□□□□□ -0.28
XRN1-204ENST00000465074 A0A087X0B3 334 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.32□□□□□ -0.28
XRN1-204ENST00000465074 FAM86C2PA6NEL3 165 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 MYMKA6NI61 221 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 LILRB3O75022 631 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 PROZP22891 400 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 IGFBP6P24592 240 aaPredicted RBP13.32□□□□□ -0.28
XRN1-204ENST00000465074 ME1P48163 572 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 CLCN4P51793 760 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 DSG1Q02413 1049 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 NAB2Q15742 525 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 C18orf25Q96B23 403 aaPredicted RBP13.32□□□□□ -0.28
XRN1-204ENST00000465074 SNX27Q96L92 541 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 FBXL18Q96ME1 805 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 PPP1R10Q96QC0 940 aaKnown RBP13.32□□□□□ -0.28
XRN1-204ENST00000465074 PHF7Q9BWX1 381 aaPredicted RBP13.32□□□□□ -0.28
XRN1-204ENST00000465074 MRPL44Q9H9J2 332 aaKnown RBP13.32□□□□□ -0.28
XRN1-204ENST00000465074 MAN1C1Q9NR34 630 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 DZANK1Q9NVP4 752 aa13.32□□□□□ -0.28
XRN1-204ENST00000465074 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 ABLIM1O14639 778 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 CUTAO60888 179 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 PPP6R2O75170 966 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 GLUD1P00367 558 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 CXCL8P10145 99 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 PDIA4P13667 645 aaKnown RBP13.31□□□□□ -0.28
XRN1-204ENST00000465074 TNFSF9P41273 254 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 ZNF131P52739 623 aa13.31□□□□□ -0.28
XRN1-204ENST00000465074 SOX4Q06945 474 aaPredicted RBP13.31□□□□□ -0.28
XRN1-204ENST00000465074 HERC4Q5GLZ8 1057 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms