RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 PDZD3Q86UT5 571 aa10.61□□□□□ -0.71
APP-213ENST00000464867 ZNF280BQ86YH2 543 aa10.61□□□□□ -0.71
APP-213ENST00000464867 SPEM1Q8N4L4 309 aa10.61□□□□□ -0.71
APP-213ENST00000464867 FAM227BQ96M60 508 aa10.61□□□□□ -0.71
APP-213ENST00000464867 TRAIPQ9BWF2 469 aa10.61□□□□□ -0.71
APP-213ENST00000464867 DCTPP1Q9H773 170 aa10.61□□□□□ -0.71
APP-213ENST00000464867 CNNM2Q9H8M5 875 aa10.61□□□□□ -0.71
APP-213ENST00000464867 PSTPIP2Q9H939 334 aa10.61□□□□□ -0.71
APP-213ENST00000464867 SEC63Q9UGP8 760 aaKnown RBP10.61□□□□□ -0.71
APP-213ENST00000464867 WDFY3Q8IZQ1 3526 aa10.61□□□□□ -0.71
APP-213ENST00000464867 IGKV6D-21A0A0A0MT36 114 aa10.6□□□□□ -0.71
APP-213ENST00000464867 TTLL8A6PVC2 850 aa10.6□□□□□ -0.71
APP-213ENST00000464867 ZBTB42B2RXF5 422 aa10.6□□□□□ -0.71
APP-213ENST00000464867 NRP1O14786 923 aa10.6□□□□□ -0.71
APP-213ENST00000464867 SPINT1O43278 529 aa10.6□□□□□ -0.71
APP-213ENST00000464867 ECI2O75521 394 aa10.6□□□□□ -0.71
APP-213ENST00000464867 HNRNPA1P09651 372 aaKnown RBP eCLIP10.6□□□□□ -0.71
APP-213ENST00000464867 VSIG8P0DPA2 414 aa10.6□□□□□ -0.71
APP-213ENST00000464867 MX1P20591 662 aa10.6□□□□□ -0.71
APP-213ENST00000464867 FGFR4P22455 802 aa10.6□□□□□ -0.71
APP-213ENST00000464867 CLCN3P51790 818 aa10.6□□□□□ -0.71
APP-213ENST00000464867 RAB15P59190 212 aa10.6□□□□□ -0.71
APP-213ENST00000464867 CDC42EP1Q00587 391 aa10.6□□□□□ -0.71
APP-213ENST00000464867 SH3PXD2AQ5TCZ1 1133 aa10.6□□□□□ -0.71
APP-213ENST00000464867 SWSAP1Q6NVH7 229 aa10.6□□□□□ -0.71
APP-213ENST00000464867 TRMT1LQ7Z2T5 733 aaKnown RBP10.6□□□□□ -0.71
APP-213ENST00000464867 CACNA2D4Q7Z3S7 1137 aa10.6□□□□□ -0.71
APP-213ENST00000464867 FAM3CQ92520 227 aa10.6□□□□□ -0.71
APP-213ENST00000464867 RRP36Q96EU6 259 aaKnown RBP10.6□□□□□ -0.71
APP-213ENST00000464867 MXRA8Q9BRK3 442 aa10.6□□□□□ -0.71
APP-213ENST00000464867 GCOM2Q9BZD3 368 aaPredicted RBP10.6□□□□□ -0.71
APP-213ENST00000464867 BRD9Q9H8M2 597 aa10.6□□□□□ -0.71
APP-213ENST00000464867 VPS45Q9NRW7 570 aa10.6□□□□□ -0.71
APP-213ENST00000464867 FAM105AQ9NUU6 356 aa10.6□□□□□ -0.71
APP-213ENST00000464867 TCEAL9Q9UHQ7 104 aa10.6□□□□□ -0.71
APP-213ENST00000464867 WASF3Q9UPY6 502 aa10.6□□□□□ -0.71
APP-213ENST00000464867 A0A0D9SFI3 127 aa10.59□□□□□ -0.71
APP-213ENST00000464867 ERICH2A1L162 156 aa10.59□□□□□ -0.71
APP-213ENST00000464867 DDX39AO00148 427 aaKnown RBP10.59□□□□□ -0.71
APP-213ENST00000464867 GIPC1O14908 333 aa10.59□□□□□ -0.71
APP-213ENST00000464867 CYTH3O43739 400 aa10.59□□□□□ -0.71
APP-213ENST00000464867 DDHD2O94830 711 aa10.59□□□□□ -0.71
APP-213ENST00000464867 EPN2O95208 641 aa10.59□□□□□ -0.71
APP-213ENST00000464867 CEACAM1P13688 526 aa10.59□□□□□ -0.71
APP-213ENST00000464867 SFPQP23246 707 aaKnown RBP eCLIP10.59□□□□□ -0.71
APP-213ENST00000464867 OR1G1P47890 313 aa10.59□□□□□ -0.71
APP-213ENST00000464867 GPC3P51654 580 aa10.59□□□□□ -0.71
APP-213ENST00000464867 DSG1Q02413 1049 aa10.59□□□□□ -0.71
APP-213ENST00000464867 LRRC32Q14392 662 aa10.59□□□□□ -0.71
APP-213ENST00000464867 IMMTQ16891 758 aaKnown RBP10.59□□□□□ -0.71
APP-213ENST00000464867 PPM1LQ5SGD2 360 aa10.59□□□□□ -0.71
APP-213ENST00000464867 C19orf48Q6RUI8 117 aa10.59□□□□□ -0.71
APP-213ENST00000464867 ABHD15Q6UXT9 468 aa10.59□□□□□ -0.71
APP-213ENST00000464867 TAS1R1Q7RTX1 841 aa10.59□□□□□ -0.71
APP-213ENST00000464867 TICAM2Q86XR7 235 aa10.59□□□□□ -0.71
APP-213ENST00000464867 GLYCTKQ8IVS8 523 aa10.59□□□□□ -0.71
APP-213ENST00000464867 ZNF668Q96K58 619 aaPredicted RBP10.59□□□□□ -0.71
APP-213ENST00000464867 INO80BQ9C086 356 aaPredicted RBP10.59□□□□□ -0.71
APP-213ENST00000464867 PIN4Q9Y237 131 aaKnown RBP10.59□□□□□ -0.71
APP-213ENST00000464867 PRG3Q9Y2Y8 225 aaPredicted RBP10.59□□□□□ -0.71
APP-213ENST00000464867 NEUROG3Q9Y4Z2 214 aa10.59□□□□□ -0.71
APP-213ENST00000464867 PCDHGA5Q9Y5G8 931 aa10.59□□□□□ -0.71
APP-213ENST00000464867 SMG1Q96Q15 3661 aaKnown RBP10.59□□□□□ -0.71
APP-213ENST00000464867 FIGNL2A6NMB9 653 aa10.58□□□□□ -0.72
APP-213ENST00000464867 ZNF623O75123 536 aa10.58□□□□□ -0.72
APP-213ENST00000464867 RDXP35241 583 aaKnown RBP10.58□□□□□ -0.72
APP-213ENST00000464867 NTHL1P78549 312 aa10.58□□□□□ -0.72
APP-213ENST00000464867 SLC35G1Q2M3R5 365 aa10.58□□□□□ -0.72
APP-213ENST00000464867 ZNF589Q86UQ0 364 aaPredicted RBP10.58□□□□□ -0.72
APP-213ENST00000464867 CCDC60Q8IWA6 550 aaPredicted RBP10.58□□□□□ -0.72
APP-213ENST00000464867 LRRC71Q8N4P6 559 aa10.58□□□□□ -0.72
APP-213ENST00000464867 ITFG1Q8TB96 612 aa10.58□□□□□ -0.72
APP-213ENST00000464867 AGO4Q9HCK5 861 aaKnown RBP10.58□□□□□ -0.72
APP-213ENST00000464867 FNIP2Q9P278 1114 aa10.58□□□□□ -0.72
APP-213ENST00000464867 KCNH3Q9ULD8 1083 aa10.58□□□□□ -0.72
APP-213ENST00000464867 PCDHA6Q9UN73 950 aa10.58□□□□□ -0.72
APP-213ENST00000464867 PCDHA8Q9Y5H6 950 aa10.58□□□□□ -0.72
APP-213ENST00000464867 CNTNAP2Q9UHC6 1331 aa10.58□□□□□ -0.72
APP-213ENST00000464867 C4orf47A7E2U8 309 aa10.57□□□□□ -0.72
APP-213ENST00000464867 ESPNB1AK53 854 aa10.57□□□□□ -0.72
APP-213ENST00000464867 ERVH48-1M5A8F1 160 aa10.57□□□□□ -0.72
APP-213ENST00000464867 RPP40O75818 363 aaKnown RBP10.57□□□□□ -0.72
APP-213ENST00000464867 PAPSS2O95340 614 aaPredicted RBP10.57□□□□□ -0.72
APP-213ENST00000464867 TOP3BO95985 862 aaKnown RBP10.57□□□□□ -0.72
APP-213ENST00000464867 POMCP01189 267 aa10.57□□□□□ -0.72
APP-213ENST00000464867 CCDC192P0DO97 292 aa10.57□□□□□ -0.72
APP-213ENST00000464867 MPLP40238 635 aa10.57□□□□□ -0.72
APP-213ENST00000464867 RELBQ01201 579 aa10.57□□□□□ -0.72
APP-213ENST00000464867 C19orf57Q0VDD7 668 aa10.57□□□□□ -0.72
APP-213ENST00000464867 NMIQ13287 307 aaPredicted RBP10.57□□□□□ -0.72
APP-213ENST00000464867 ITGB3BPQ13352 177 aaPredicted RBP10.57□□□□□ -0.72
APP-213ENST00000464867 USP41Q3LFD5 358 aa10.57□□□□□ -0.72
APP-213ENST00000464867 PABPC1LQ4VXU2 614 aaKnown RBP10.57□□□□□ -0.72
APP-213ENST00000464867 LILRA6Q6PI73 481 aa10.57□□□□□ -0.72
APP-213ENST00000464867 WDR5BQ86VZ2 330 aa10.57□□□□□ -0.72
APP-213ENST00000464867 GPR65Q8IYL9 337 aa10.57□□□□□ -0.72
APP-213ENST00000464867 GLIS3Q8NEA6 775 aa10.57□□□□□ -0.72
APP-213ENST00000464867 ELSPBP1Q96BH3 223 aa10.57□□□□□ -0.72
APP-213ENST00000464867 FAM167AQ96KS9 214 aa10.57□□□□□ -0.72
APP-213ENST00000464867 MKNK1Q9BUB5 465 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms