RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 EARS2Q5JPH6 523 aaKnown RBP16.17■□□□□ 0.18
MCF2L-220ENST00000464800 RSPO2Q6UXX9 243 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-220ENST00000464800 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
MCF2L-220ENST00000464800 ITFG1Q8TB96 612 aa16.17■□□□□ 0.18
MCF2L-220ENST00000464800 HSD17B14Q9BPX1 270 aa16.17■□□□□ 0.18
MCF2L-220ENST00000464800 KXD1Q9BQD3 176 aa16.17■□□□□ 0.18
MCF2L-220ENST00000464800 TM6SF1Q9BZW5 370 aa16.17■□□□□ 0.18
MCF2L-220ENST00000464800 GJB4Q9NTQ9 266 aa16.17■□□□□ 0.18
MCF2L-220ENST00000464800 PRMT7Q9NVM4 692 aaPredicted RBP16.17■□□□□ 0.18
MCF2L-220ENST00000464800 PCDHA12Q9UN75 941 aa16.17■□□□□ 0.18
MCF2L-220ENST00000464800 PCDHGA2Q9Y5H1 932 aa16.17■□□□□ 0.18
MCF2L-220ENST00000464800 FAM205CA6NFA0 338 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 FAM170BA6NMN3 283 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 PTGESO14684 152 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 N4BP3O15049 544 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 ADAM12O43184 909 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 EPB41L2O43491 1005 aaKnown RBP16.16■□□□□ 0.18
MCF2L-220ENST00000464800 THP07101 528 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 CSTF1Q05048 431 aaKnown RBP16.16■□□□□ 0.18
MCF2L-220ENST00000464800 SCRN1Q12765 414 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 CALCRLQ16602 461 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 TMEM132AQ24JP5 1023 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 PABPC1LQ4VXU2 614 aaKnown RBP16.16■□□□□ 0.18
MCF2L-220ENST00000464800 VARS2Q5ST30 1063 aaKnown RBP16.16■□□□□ 0.18
MCF2L-220ENST00000464800 AXDND1Q5T1B0 1012 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-220ENST00000464800 ZBTB8OSQ8IWT0 167 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 PIGOQ8TEQ8 1089 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 ATRIPQ8WXE1 791 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 LTB4R2Q9NPC1 389 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 PDRG1Q9NUG6 133 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 KCNH3Q9ULD8 1083 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 MTF2Q9Y483 593 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-220ENST00000464800 NCOR2Q9Y618 2525 aa16.16■□□□□ 0.18
MCF2L-220ENST00000464800 RECQL4O94761 1208 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 KRT2P35908 639 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 UVSSAQ2YD98 709 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 ZBTB41Q5SVQ8 909 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 CDCA2Q69YH5 1023 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-220ENST00000464800 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-220ENST00000464800 TPRG1Q6ZUI0 275 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 NPAS3Q8IXF0 933 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 GPR161Q8N6U8 529 aaKnown RBP16.15■□□□□ 0.18
MCF2L-220ENST00000464800 ING5Q8WYH8 240 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 SECISBP2LQ93073 1101 aaKnown RBP16.15■□□□□ 0.18
MCF2L-220ENST00000464800 PDZD7Q9H5P4 517 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 TTC12Q9H892 705 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-220ENST00000464800 BRMS1Q9HCU9 246 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 GPRC5CQ9NQ84 441 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 HCFC1R1Q9NWW0 138 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 SNTG2Q9NY99 539 aa16.15■□□□□ 0.18
MCF2L-220ENST00000464800 GPR179Q6PRD1 2367 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 DNAH14Q0VDD8 3507 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 CD72P21854 359 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 SDHBP21912 280 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 OR1D2P34982 312 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 NR5A1Q13285 461 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 RAB33AQ14088 237 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 FAM187BQ17R55 369 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 RTL10Q7L3V2 364 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 MAEAQ7L5Y9 396 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 MCPH1Q8NEM0 835 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 WASF1Q92558 559 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 ADPGKQ9BRR6 497 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 C2orf40Q9H1Z8 148 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 FZD8Q9H461 694 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 ZSCAN32Q9NX65 697 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 SMG5Q9UPR3 1016 aaKnown RBP16.14■□□□□ 0.17
MCF2L-220ENST00000464800 TRIP11Q15643 1979 aa16.14■□□□□ 0.17
MCF2L-220ENST00000464800 NCAM2O15394 837 aa16.13■□□□□ 0.17
MCF2L-220ENST00000464800 NEMFO60524 1076 aa16.13■□□□□ 0.17
MCF2L-220ENST00000464800 XRCC6P12956 609 aaKnown RBP eCLIP16.13■□□□□ 0.17
MCF2L-220ENST00000464800 TARSP26639 723 aaKnown RBP16.13■□□□□ 0.17
MCF2L-220ENST00000464800 TXKP42681 527 aa16.13■□□□□ 0.17
MCF2L-220ENST00000464800 PRPF4BQ13523 1007 aaKnown RBP16.13■□□□□ 0.17
MCF2L-220ENST00000464800 NAB2Q15742 525 aa16.13■□□□□ 0.17
MCF2L-220ENST00000464800 ZBTB44Q8NCP5 570 aa16.13■□□□□ 0.17
MCF2L-220ENST00000464800 TNFRSF25Q93038 417 aa16.13■□□□□ 0.17
MCF2L-220ENST00000464800 NELL2Q99435 816 aa16.13■□□□□ 0.17
MCF2L-220ENST00000464800 DNMT3BQ9UBC3 853 aaKnown RBP16.13■□□□□ 0.17
MCF2L-220ENST00000464800 ORC3Q9UBD5 711 aaPredicted RBP16.13■□□□□ 0.17
MCF2L-220ENST00000464800 MTRRQ9UBK8 725 aa16.13■□□□□ 0.17
MCF2L-220ENST00000464800 MRPS17Q9Y2R5 130 aaKnown RBP16.13■□□□□ 0.17
MCF2L-220ENST00000464800 MRPS23Q9Y3D9 190 aaKnown RBP16.13■□□□□ 0.17
MCF2L-220ENST00000464800 A0A087WWV3 80 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 TTLL13PA6NNM8 815 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 TMEM189-UBE2V1I3L0A0 370 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 PFKFB2O60825 505 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 DTNBO60941 627 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 ECI2O75521 394 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 PRKCBP05771 671 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 ATP2B1P20020 1258 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 FGFR3P22607 806 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 RPS9P46781 194 aaKnown RBP16.12■□□□□ 0.17
MCF2L-220ENST00000464800 MAPK6Q16659 721 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 ZNF852Q6ZMS4 543 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 NOSTRINQ8IVI9 506 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 CLDN23Q96B33 292 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 CXCL16Q9H2A7 254 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 EPC1Q9H2F5 836 aa16.12■□□□□ 0.17
MCF2L-220ENST00000464800 GDE1Q9NZC3 331 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms