RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 MRI1Q9BV20 369 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 CALCOCO1Q9P1Z2 691 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 IP6K2Q9UHH9 426 aa7.79□□□□□ -1.16
PTCD3-205ENST00000464541 PEX11BO96011 259 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 CT47B1P0C2W7 299 aaPredicted RBP7.78□□□□□ -1.16
PTCD3-205ENST00000464541 RAP2AP10114 183 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 ATP5JP18859 108 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 ALDH1A3P47895 512 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 CTXN1P60606 82 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 C3orf36Q3SXR2 165 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 NRN1LQ496H8 165 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 DBX2Q6ZNG2 339 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 RSPH3Q86UC2 560 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 IL17DQ8TAD2 202 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 EXTL1Q92935 676 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 NDC1Q9BTX1 674 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 CDH19Q9H159 772 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 LDAHQ9H6V9 325 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 SPON1Q9HCB6 807 aa7.78□□□□□ -1.16
PTCD3-205ENST00000464541 THRAP3Q9Y2W1 955 aaKnown RBP7.78□□□□□ -1.16
PTCD3-205ENST00000464541 DIRC3C9JPN6 131 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 RFPL1O75677 317 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 RECQL4O94761 1208 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 ZSCAN20P17040 1043 aaPredicted RBP7.77□□□□□ -1.17
PTCD3-205ENST00000464541 PCSK1P29120 753 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 RAB27AP51159 221 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 ZXDCQ2QGD7 858 aaPredicted RBP7.77□□□□□ -1.17
PTCD3-205ENST00000464541 DACT2Q5SW24 774 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 ATXN7L2Q5T6C5 722 aaPredicted RBP7.77□□□□□ -1.17
PTCD3-205ENST00000464541 THEMIS2Q5TEJ8 643 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 PLXDC1Q8IUK5 500 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 PRR18Q8N4B5 295 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 OR10H5Q8NGA6 315 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 SLC35B2Q8TB61 432 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 NSUN6Q8TEA1 469 aaKnown RBP7.77□□□□□ -1.17
PTCD3-205ENST00000464541 DCLRE1CQ96SD1 692 aaKnown RBP7.77□□□□□ -1.17
PTCD3-205ENST00000464541 RHOBTB2Q9BYZ6 727 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 ZNF180Q9UJW8 692 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 PCDHA13Q9Y5I0 950 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 ACTL7AQ9Y615 435 aa7.77□□□□□ -1.17
PTCD3-205ENST00000464541 PLSCR1O15162 318 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 PPM1GO15355 546 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-205ENST00000464541 AMHP03971 560 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 POU2F2P09086 479 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 PF4V1P10720 104 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 ALAS1P13196 640 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 PDCP20941 246 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 FPR1P21462 350 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 TARDBPQ13148 414 aaKnown RBP eCLIP7.76□□□□□ -1.17
PTCD3-205ENST00000464541 IL10RAQ13651 578 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 TOB2Q14106 344 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-205ENST00000464541 RABL3Q5HYI8 236 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 USP45Q70EL2 814 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 ZGPATQ8N5A5 531 aaKnown RBP7.76□□□□□ -1.17
PTCD3-205ENST00000464541 FBXO18Q8NFZ0 1043 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 IFI44Q8TCB0 444 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 STON2Q8WXE9 905 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 MRGPRX4Q96LA9 322 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 MAN1C1Q9NR34 630 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 CEP72Q9P209 647 aa7.76□□□□□ -1.17
PTCD3-205ENST00000464541 GRXCR1A8MXD5 290 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 WNT10BO00744 389 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 SLC16A6O15403 523 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 POMCP01189 267 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 U2AF1L5P0DN76 240 aaPredicted RBP7.75□□□□□ -1.17
PTCD3-205ENST00000464541 CYP2C19P33261 490 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 U2AF1Q01081 240 aaKnown RBP eCLIP7.75□□□□□ -1.174e-6■■■□□ 19.2
PTCD3-205ENST00000464541 FOXE3Q13461 319 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 CSRP2Q16527 193 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 MIIPQ5JXC2 388 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 PGBD4Q96DM1 585 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 TMX3Q96JJ7 454 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 AIFM3Q96NN9 605 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 RTFDC1Q9BY42 306 aaPredicted RBP7.75□□□□□ -1.17
PTCD3-205ENST00000464541 C11orf54Q9H0W9 315 aaPredicted RBP7.75□□□□□ -1.17
PTCD3-205ENST00000464541 METTL14Q9HCE5 456 aaKnown RBP7.75□□□□□ -1.17
PTCD3-205ENST00000464541 POGKQ9P215 609 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 POLHQ9Y253 713 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 PCDHB1Q9Y5F3 818 aa7.75□□□□□ -1.17
PTCD3-205ENST00000464541 PPFIA4O75335 1185 aa7.74□□□□□ -1.17
PTCD3-205ENST00000464541 ARIH2O95376 493 aa7.74□□□□□ -1.17
PTCD3-205ENST00000464541 CREMQ03060 361 aa7.74□□□□□ -1.17
PTCD3-205ENST00000464541 NFE2Q16621 373 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-205ENST00000464541 SPRED1Q7Z699 444 aa7.74□□□□□ -1.17
PTCD3-205ENST00000464541 NLGN4YQ8NFZ3 816 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-205ENST00000464541 CACTINQ8WUQ7 758 aaKnown RBP7.74□□□□□ -1.17
PTCD3-205ENST00000464541 JPH3Q8WXH2 748 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-205ENST00000464541 ZNF503Q96F45 646 aa7.74□□□□□ -1.17
PTCD3-205ENST00000464541 CLPTM1LQ96KA5 538 aa7.74□□□□□ -1.17
PTCD3-205ENST00000464541 PUS7Q96PZ0 661 aaKnown RBP7.74□□□□□ -1.17
PTCD3-205ENST00000464541 ZIM2Q9NZV7 527 aa7.74□□□□□ -1.17
PTCD3-205ENST00000464541 SLC23A1Q9UHI7 598 aa7.74□□□□□ -1.17
PTCD3-205ENST00000464541 EIF2B4Q9UI10 523 aaKnown RBP7.74□□□□□ -1.17
PTCD3-205ENST00000464541 PNPLA7Q6ZV29 1317 aa7.74□□□□□ -1.17
PTCD3-205ENST00000464541 MTHFD1P11586 935 aaKnown RBP7.73□□□□□ -1.17
PTCD3-205ENST00000464541 INSRRP14616 1297 aa7.73□□□□□ -1.17
PTCD3-205ENST00000464541 FXR1P51114 621 aaKnown RBP eCLIP7.73□□□□□ -1.17
PTCD3-205ENST00000464541 DSC2Q02487 901 aa7.73□□□□□ -1.17
PTCD3-205ENST00000464541 TLE1Q04724 770 aa7.73□□□□□ -1.17
PTCD3-205ENST00000464541 UBXN2BQ14CS0 331 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms