RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 DPY19L2Q6NUT2 758 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 CCDC62Q6P9F0 684 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 MAATS1Q7Z4T9 603 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 GTF3C2Q8WUA4 911 aaPredicted RBP18.78■□□□□ 0.6
LMO2-204ENST00000464025 CASKIN2Q8WXE0 1202 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 CGRRF1Q99675 332 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 SH3GL2Q99962 352 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 JPH2Q9BR39 696 aaPredicted RBP18.78■□□□□ 0.6
LMO2-204ENST00000464025 CCDC113Q9H0I3 377 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 WNT8AQ9H1J5 351 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 TAF1DQ9H5J8 278 aaPredicted RBP18.78■□□□□ 0.6
LMO2-204ENST00000464025 TXNRD2Q9NNW7 524 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 VPS18Q9P253 973 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 FAN1Q9Y2M0 1017 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 PCDHB2Q9Y5E7 798 aa18.78■□□□□ 0.6
LMO2-204ENST00000464025 TNNI1P19237 187 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 MRPS25P82663 173 aaKnown RBP18.77■□□□□ 0.6
LMO2-204ENST00000464025 POU5F1Q01860 360 aaKnown RBP18.77■□□□□ 0.6
LMO2-204ENST00000464025 KCTD2Q14681 263 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 LY6KQ17RY6 165 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 CLEC16AQ2KHT3 1053 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 C9orf131Q5VYM1 1079 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 TDRD10Q5VZ19 366 aaKnown RBP18.77■□□□□ 0.6
LMO2-204ENST00000464025 ARMC9Q7Z3E5 817 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 KLHL7Q8IXQ5 586 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 UBL4BQ8N7F7 174 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 ATP8B4Q8TF62 1192 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 CD101Q93033 1021 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 MMP19Q99542 508 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 MSTO1Q9BUK6 570 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 TARS2Q9BW92 718 aaKnown RBP18.77■□□□□ 0.6
LMO2-204ENST00000464025 RBAKQ9NYW8 714 aaPredicted RBP18.77■□□□□ 0.6
LMO2-204ENST00000464025 CNTN6Q9UQ52 1028 aa18.77■□□□□ 0.6
LMO2-204ENST00000464025 SCN4AP35499 1836 aa18.77■□□□□ 0.59
LMO2-204ENST00000464025 ARIH2O95376 493 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 UNGP13051 313 aaPredicted RBP18.76■□□□□ 0.59
LMO2-204ENST00000464025 CTNNA2P26232 953 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 GGCXP38435 758 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 Q3C1V9 767 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 LDLRAD1Q5T700 205 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 TAF3Q5VWG9 929 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 RNPC3Q96LT9 517 aaKnown RBP18.76■□□□□ 0.59
LMO2-204ENST00000464025 AVENQ9NQS1 362 aaPredicted RBP18.76■□□□□ 0.59
LMO2-204ENST00000464025 NFU1Q9UMS0 254 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 MCM3APO60318 1980 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 OPA1O60313 960 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 MSCO60682 206 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 RNF40O75150 1001 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 VNN1O95497 513 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 FGGP02679 453 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 MYBL1P10243 752 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 TBXAS1P24557 533 aaPredicted RBP18.76■□□□□ 0.59
LMO2-204ENST00000464025 EPHX2P34913 555 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 ACOT2P49753 483 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 PEX5P50542 639 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 PTENP60484 403 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 PPP1R2P3Q6NXS1 205 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 BRSK2Q8IWQ3 736 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 PRPF31Q8WWY3 499 aaKnown RBP18.76■□□□□ 0.59
LMO2-204ENST00000464025 OPTNQ96CV9 577 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 ZBTB45Q96K62 511 aaPredicted RBP18.76■□□□□ 0.59
LMO2-204ENST00000464025 GDAP1L1Q96MZ0 367 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 ZSWIM1Q9BR11 485 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 AP1M1Q9BXS5 423 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 MRPL4Q9BYD3 311 aaKnown RBP18.76■□□□□ 0.59
LMO2-204ENST00000464025 C2orf40Q9H1Z8 148 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.76■□□□□ 0.59
LMO2-204ENST00000464025 TRPC6Q9Y210 931 aa18.76■□□□□ 0.59
LMO2-204ENST00000464025 ZBTB42B2RXF5 422 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 FAM189A1O60320 539 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 TOM1L1O75674 476 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 EDN1P05305 212 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 ACO1P21399 889 aaKnown RBP18.75■□□□□ 0.59
LMO2-204ENST00000464025 PIK3CAP42336 1068 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 WNT7BP56706 349 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 ERVK-9P63128 1117 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 SURF1Q15526 300 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 TRIM72Q6ZMU5 477 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 IQCKQ8N0W5 287 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 ZNF564Q8TBZ8 553 aaPredicted RBP18.75■□□□□ 0.59
LMO2-204ENST00000464025 ALG3Q92685 438 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 TRIM11Q96F44 468 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 HINFPQ9BQA5 517 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 PI4K2AQ9BTU6 479 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 R3HDMLQ9H3Y0 253 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 ACP6Q9NPH0 428 aa18.75■□□□□ 0.59
LMO2-204ENST00000464025 GOLGA6L10A0A0M3HER8 536 aa18.74■□□□□ 0.59
LMO2-204ENST00000464025 CCDC66A2RUB6 948 aa18.74■□□□□ 0.59
LMO2-204ENST00000464025 ZSCAN5CA6NGD5 496 aaPredicted RBP18.74■□□□□ 0.59
LMO2-204ENST00000464025 ASB14A6NK59 587 aa18.74■□□□□ 0.59
LMO2-204ENST00000464025 CLDN3O15551 220 aa18.74■□□□□ 0.59
LMO2-204ENST00000464025 HSF2BPO75031 334 aa18.74■□□□□ 0.59
LMO2-204ENST00000464025 CYP1A1P04798 512 aaPredicted RBP18.74■□□□□ 0.59
LMO2-204ENST00000464025 PGK2P07205 417 aa18.74■□□□□ 0.59
LMO2-204ENST00000464025 ITGA4P13612 1032 aa18.74■□□□□ 0.59
LMO2-204ENST00000464025 CTNNA1P35221 906 aaKnown RBP18.74■□□□□ 0.59
LMO2-204ENST00000464025 HSPA9P38646 679 aaKnown RBP18.74■□□□□ 0.59
LMO2-204ENST00000464025 MKRN4PQ13434 485 aaPredicted RBP18.74■□□□□ 0.59
LMO2-204ENST00000464025 CUL2Q13617 745 aa18.74■□□□□ 0.59
LMO2-204ENST00000464025 TTLL12Q14166 644 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms