RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 NT5C3AQ9H0P0 336 aa21.21■□□□□ 0.99
TSC2-209ENST00000463601 FBXO2Q9UK22 296 aaPredicted RBP21.21■□□□□ 0.99
TSC2-209ENST00000463601 MYH11P35749 1972 aa21.2■□□□□ 0.98
TSC2-209ENST00000463601 CCDC195A0A1B0GUA6 201 aa21.2■□□□□ 0.98
TSC2-209ENST00000463601 CEBPZQ03701 1054 aaKnown RBP21.2■□□□□ 0.98
TSC2-209ENST00000463601 PKP1Q13835 747 aa21.2■□□□□ 0.98
TSC2-209ENST00000463601 TMEM119Q4V9L6 283 aa21.2■□□□□ 0.98
TSC2-209ENST00000463601 CCDC149Q6ZUS6 474 aa21.2■□□□□ 0.98
TSC2-209ENST00000463601 CMASQ8NFW8 434 aaPredicted RBP21.2■□□□□ 0.98
TSC2-209ENST00000463601 DOCK8Q8NF50 2099 aa21.2■□□□□ 0.98
TSC2-209ENST00000463601 TGM5O43548 720 aa21.19■□□□□ 0.98
TSC2-209ENST00000463601 N4BP1O75113 896 aaKnown RBP21.19■□□□□ 0.98
TSC2-209ENST00000463601 HIP1RO75146 1068 aa21.19■□□□□ 0.98
TSC2-209ENST00000463601 THP07101 528 aa21.19■□□□□ 0.98
TSC2-209ENST00000463601 MARCKSP29966 332 aaPredicted RBP21.19■□□□□ 0.98
TSC2-209ENST00000463601 UBA7P41226 1012 aa21.19■□□□□ 0.98
TSC2-209ENST00000463601 NPTX2P47972 431 aa21.19■□□□□ 0.98
TSC2-209ENST00000463601 NASPP49321 788 aaPredicted RBP21.19■□□□□ 0.98
TSC2-209ENST00000463601 EFNA5P52803 228 aa21.19■□□□□ 0.98
TSC2-209ENST00000463601 PEX3P56589 373 aa21.19■□□□□ 0.98
TSC2-209ENST00000463601 ZRSR1Q15695 479 aaKnown RBP21.19■□□□□ 0.98
TSC2-209ENST00000463601 ATF7IP2Q5U623 682 aa21.19■□□□□ 0.98
TSC2-209ENST00000463601 C15orf39Q6ZRI6 1047 aa21.19■□□□□ 0.98
TSC2-209ENST00000463601 ZNF707Q96C28 371 aaPredicted RBP21.19■□□□□ 0.98
TSC2-209ENST00000463601 ADPGKQ9BRR6 497 aa21.19■□□□□ 0.98
TSC2-209ENST00000463601 SRPRBQ9Y5M8 271 aaKnown RBP21.19■□□□□ 0.98
TSC2-209ENST00000463601 CCDC169A6NNP5 214 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 F13A1P00488 732 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 MAPK7Q13164 816 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 SLC39A14Q15043 492 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 DCAF4L1Q3SXM0 396 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 GLRA4Q5JXX5 417 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 FAM171A1Q5VUB5 890 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 FOXD4L5Q5VV16 416 aaPredicted RBP21.18■□□□□ 0.98
TSC2-209ENST00000463601 RINT1Q6NUQ1 792 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 LILRA6Q6PI73 481 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 TAS1R3Q7RTX0 852 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 UBALD2Q8IYN6 164 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 PLCD3Q8N3E9 789 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 CEP120Q8N960 986 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 FOXD4L4Q8WXT5 416 aaPredicted RBP21.18■□□□□ 0.98
TSC2-209ENST00000463601 CDK5RAP3Q96JB5 506 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 PHOX2BQ99453 314 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 PLIN2Q99541 437 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 FNIP2Q9P278 1114 aa21.18■□□□□ 0.98
TSC2-209ENST00000463601 SF3B1O75533 1304 aaKnown RBP eCLIP21.18■□□□□ 0.989e-6■■■■■ 68.9
TSC2-209ENST00000463601 SFI1A8K8P3 1242 aa21.17■□□□□ 0.98
TSC2-209ENST00000463601 K7ERI5 159 aa21.17■□□□□ 0.98
TSC2-209ENST00000463601 AVPR2P30518 371 aa21.17■□□□□ 0.98
TSC2-209ENST00000463601 TCF15Q12870 199 aa21.17■□□□□ 0.98
TSC2-209ENST00000463601 C1orf186Q6ZWK4 172 aa21.17■□□□□ 0.98
TSC2-209ENST00000463601 OTOP3Q7RTS5 596 aa21.17■□□□□ 0.98
TSC2-209ENST00000463601 SYT2Q8N9I0 419 aaPredicted RBP21.17■□□□□ 0.98
TSC2-209ENST00000463601 ACSF2Q96CM8 615 aaPredicted RBP21.17■□□□□ 0.98
TSC2-209ENST00000463601 CCSER1Q9C0I3 900 aa21.17■□□□□ 0.98
TSC2-209ENST00000463601 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.17■□□□□ 0.98
TSC2-209ENST00000463601 CEP57Q86XR8 500 aa21.16■□□□□ 0.98
TSC2-209ENST00000463601 GPR65Q8IYL9 337 aa21.16■□□□□ 0.98
TSC2-209ENST00000463601 LINC00301Q8NCQ3 95 aa21.16■□□□□ 0.98
TSC2-209ENST00000463601 LNX1Q8TBB1 728 aaPredicted RBP21.16■□□□□ 0.98
TSC2-209ENST00000463601 LRRC15Q8TF66 581 aa21.16■□□□□ 0.98
TSC2-209ENST00000463601 SMG7Q92540 1137 aaKnown RBP21.16■□□□□ 0.98
TSC2-209ENST00000463601 CALML4Q96GE6 196 aa21.16■□□□□ 0.98
TSC2-209ENST00000463601 ZNF396Q96N95 335 aaPredicted RBP21.16■□□□□ 0.98
TSC2-209ENST00000463601 CLIC6Q96NY7 704 aa21.16■□□□□ 0.98
TSC2-209ENST00000463601 PPP1R10Q96QC0 940 aaKnown RBP21.16■□□□□ 0.98
TSC2-209ENST00000463601 ACO2Q99798 780 aaKnown RBP21.16■□□□□ 0.98
TSC2-209ENST00000463601 CLSTN3Q9BQT9 956 aa21.16■□□□□ 0.98
TSC2-209ENST00000463601 PTPRHQ9HD43 1115 aa21.16■□□□□ 0.98
TSC2-209ENST00000463601 WDR6Q9NNW5 1121 aaKnown RBP21.16■□□□□ 0.98
TSC2-209ENST00000463601 TNFSF13BQ9Y275 285 aa21.16■□□□□ 0.98
TSC2-209ENST00000463601 CITO14578 2027 aa21.16■□□□□ 0.98
TSC2-209ENST00000463601 PHLPP2Q6ZVD8 1323 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 ADAM12O43184 909 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 SLC12A3P55017 1021 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 OSTNP61366 133 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 RAD51AP2Q09MP3 1159 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 KARSQ15046 597 aaKnown RBP21.15■□□□□ 0.98
TSC2-209ENST00000463601 SPECC1Q5M775 1068 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 CD300LGQ6UXG3 332 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 USP49Q70CQ1 688 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 EPSTI1Q96J88 318 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 TTPALQ9BTX7 342 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 TARS2Q9BW92 718 aaKnown RBP21.15■□□□□ 0.98
TSC2-209ENST00000463601 CDT1Q9H211 546 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 PLEKHA4Q9H4M7 779 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 KCNK12Q9HB15 430 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 GOLGA2P5Q9HBQ8 144 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 ARHGAP28Q9P2N2 729 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 TFIP11Q9UBB9 837 aaKnown RBP21.15■□□□□ 0.98
TSC2-209ENST00000463601 CACNA1HO95180 2353 aa21.15■□□□□ 0.98
TSC2-209ENST00000463601 USP34Q70CQ2 3546 aa21.14■□□□□ 0.97
TSC2-209ENST00000463601 CLUHO75153 1309 aa21.14■□□□□ 0.97
TSC2-209ENST00000463601 PAPLNO95428 1278 aa21.14■□□□□ 0.97
TSC2-209ENST00000463601 PLA2G4BP0C869 781 aa21.14■□□□□ 0.97
TSC2-209ENST00000463601 PLCG1P19174 1290 aa21.14■□□□□ 0.97
TSC2-209ENST00000463601 GUCY2CP25092 1073 aa21.14■□□□□ 0.97
TSC2-209ENST00000463601 MRE11P49959 708 aa21.14■□□□□ 0.97
TSC2-209ENST00000463601 CLCNKBP51801 687 aa21.14■□□□□ 0.97
TSC2-209ENST00000463601 DMP1Q13316 513 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms