RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 CXXC1Q9P0U4 656 aaPredicted RBP15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 PARP2Q9UGN5 583 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 COL4A6Q14031 1691 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 LACTBL1A8MY62 500 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 OFD1O75665 1012 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 GNA14O95837 355 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 EPB41P11171 864 aaKnown RBP15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 AFF1P51825 1210 aaKnown RBP15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 CLDN10P78369 228 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 ENPEPQ07075 957 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 HSP90AA2PQ14568 343 aaPredicted RBP15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 PSMD6Q15008 389 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 CLLU1OSQ5K130 101 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 C1orf220Q5T0J3 134 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 NPAS4Q8IUM7 802 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 TRIM59Q8IWR1 403 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 HACE1Q8IYU2 909 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 TMC2Q8TDI7 906 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 CNOT6LQ96LI5 555 aaKnown RBP15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 ASB7Q9H672 318 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 RSAD1Q9HA92 442 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 METTL14Q9HCE5 456 aaKnown RBP15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 PDE11AQ9HCR9 933 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 UBN1Q9NPG3 1134 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 KLK14Q9P0G3 267 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 CNTN3Q9P232 1028 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 PCDHB7Q9Y5E2 793 aa15.09■□□□□ 0.01
PHACTR4-203ENST00000463428 BECN2A8MW95 431 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 PTGESO14684 152 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 AMHP03971 560 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 FGFR1P11362 822 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 DLG4P78352 724 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 BFSP1Q12934 665 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 ZBTB6Q15916 424 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 HSP90AA4PQ58FG1 418 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 C9orf50Q5SZB4 431 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 INTS8Q75QN2 995 aaKnown RBP15.08■□□□□ 0
PHACTR4-203ENST00000463428 CD302Q8IX05 232 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 RNF169Q8NCN4 708 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 RNF214Q8ND24 703 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 ZFP42Q96MM3 310 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 ZMAT2Q96NC0 199 aaKnown RBP15.08■□□□□ 0
PHACTR4-203ENST00000463428 GAD1Q99259 594 aa15.08■□□□□ 0
PHACTR4-203ENST00000463428 TOPORSQ9NS56 1045 aaPredicted RBP15.08■□□□□ 0
PHACTR4-203ENST00000463428 ARMCX3Q9UH62 379 aaPredicted RBP15.08■□□□□ 0
PHACTR4-203ENST00000463428 TDRD15B5MCY1 1934 aaKnown RBP15.08■□□□□ 0
PHACTR4-203ENST00000463428 ARL5CA6NH57 179 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 LRRC10BA6NIK2 292 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 LRRIQ3A6PVS8 624 aaPredicted RBP15.07■□□□□ 0
PHACTR4-203ENST00000463428 KCNJ18B7U540 433 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 IL18RAPO95256 599 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 ATP1A3P13637 1013 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 KCNE1P15382 129 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 IBSPP21815 317 aaPredicted RBP15.07■□□□□ 0
PHACTR4-203ENST00000463428 EEF1GP26641 437 aaKnown RBP15.07■□□□□ 0
PHACTR4-203ENST00000463428 VAMP7P51809 220 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 YARSP54577 528 aaKnown RBP15.07■□□□□ 0
PHACTR4-203ENST00000463428 KCNJ12Q14500 433 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 SHHQ15465 462 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 SURF1Q15526 300 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 CCDC40Q4G0X9 1142 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 TCP11X2Q5H9J9 407 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 APTXQ7Z2E3 356 aaKnown RBP15.07■□□□□ 0
PHACTR4-203ENST00000463428 TMCO2Q7Z6W1 182 aaPredicted RBP15.07■□□□□ 0
PHACTR4-203ENST00000463428 FAM114A1Q8IWE2 563 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 EFCAB13Q8IY85 973 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 ZNF516Q92618 1163 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 ZNF689Q96CS4 500 aaPredicted RBP15.07■□□□□ 0
PHACTR4-203ENST00000463428 CASD1Q96PB1 797 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 POP1Q99575 1024 aaKnown RBP15.07■□□□□ 0
PHACTR4-203ENST00000463428 RC3H2Q9HBD1 1191 aaKnown RBP15.07■□□□□ 0
PHACTR4-203ENST00000463428 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
PHACTR4-203ENST00000463428 PLAGL2Q9UPG8 496 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 PTPRJQ12913 1337 aa15.07■□□□□ 0
PHACTR4-203ENST00000463428 TNRC18O15417 2968 aaPredicted RBP15.06■□□□□ 0
PHACTR4-203ENST00000463428 SMIM28A0A1B0GU29 152 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 ZBBXA8MT70 800 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 DGKIO75912 1065 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 UPP2O95045 317 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 MLH1P40692 756 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 GATMP50440 423 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 PPP2R3AQ06190 1150 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 SPAG1Q07617 926 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 NAB2Q15742 525 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 PHOSPHO2Q8TCD6 241 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 HELQQ8TDG4 1101 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 SLC35C1Q96A29 364 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 CCDC127Q96BQ5 260 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 FAM212AQ96EL1 285 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 TSPAN18Q96SJ8 248 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 CGRRF1Q99675 332 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 LIMA1Q9UHB6 759 aaKnown RBP15.06■□□□□ 0
PHACTR4-203ENST00000463428 LRFN2Q9ULH4 789 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 DERAQ9Y315 318 aa15.06■□□□□ 0
PHACTR4-203ENST00000463428 NFICP08651 508 aa15.05■□□□□ -0
PHACTR4-203ENST00000463428 KRT13P13646 458 aa15.05■□□□□ -0
PHACTR4-203ENST00000463428 BMP8BP34820 402 aa15.05■□□□□ -0
PHACTR4-203ENST00000463428 KCNJ6P48051 423 aa15.05■□□□□ -0
PHACTR4-203ENST00000463428 PPP3CAQ08209 521 aa15.05■□□□□ -0
PHACTR4-203ENST00000463428 JADE1Q6IE81 842 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms