RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 MRPL43Q8N983 215 aaKnown RBP14.28□□□□□ -0.12
R3HDM1-213ENST00000463230 PPP1R10Q96QC0 940 aaKnown RBP14.28□□□□□ -0.12
R3HDM1-213ENST00000463230 ACCSQ96QU6 501 aa14.28□□□□□ -0.12
R3HDM1-213ENST00000463230 MARCH5Q9NX47 278 aa14.28□□□□□ -0.12
R3HDM1-213ENST00000463230 CNTN3Q9P232 1028 aa14.28□□□□□ -0.12
R3HDM1-213ENST00000463230 ANKFY1Q9P2R3 1169 aa14.28□□□□□ -0.12
R3HDM1-213ENST00000463230 PDCD11Q14690 1871 aaKnown RBP14.28□□□□□ -0.12
R3HDM1-213ENST00000463230 A0A0B4J269 797 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 NT5C1B-RDH14C9J2C7 533 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 TMEM189-UBE2V1I3L0A0 370 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 OGTO15294 1046 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 SOD2P04179 222 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 SLFN14P0C7P3 912 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 IDEP14735 1019 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 POSTNQ15063 836 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 HERC4Q5GLZ8 1057 aaPredicted RBP14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 TMEM184AQ6ZMB5 413 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 ZBTB33Q86T24 672 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 BCL7CQ8WUZ0 217 aaPredicted RBP14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 DDX27Q96GQ7 796 aaKnown RBP14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 FAM50BQ9Y247 325 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 HPSEQ9Y251 543 aa14.27□□□□□ -0.12
R3HDM1-213ENST00000463230 PVALEFA0A1B0GWK0 134 aa14.27□□□□□ -0.13
R3HDM1-213ENST00000463230 C1RP00736 705 aa14.27□□□□□ -0.13
R3HDM1-213ENST00000463230 CREMQ03060 361 aa14.27□□□□□ -0.13
R3HDM1-213ENST00000463230 ELAVL2Q12926 359 aaKnown RBP14.27□□□□□ -0.13
R3HDM1-213ENST00000463230 HSP90AA2PQ14568 343 aaPredicted RBP14.27□□□□□ -0.13
R3HDM1-213ENST00000463230 NAB2Q15742 525 aa14.27□□□□□ -0.13
R3HDM1-213ENST00000463230 PLPP4Q5VZY2 271 aa14.27□□□□□ -0.13
R3HDM1-213ENST00000463230 TMEM173Q86WV6 379 aaPredicted RBP14.27□□□□□ -0.13
R3HDM1-213ENST00000463230 CD302Q8IX05 232 aa14.27□□□□□ -0.13
R3HDM1-213ENST00000463230 TMEM206Q9H813 350 aa14.27□□□□□ -0.13
R3HDM1-213ENST00000463230 UBE4BO95155 1302 aa14.27□□□□□ -0.13
R3HDM1-213ENST00000463230 C2orf71A6NGG8 1288 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 ADRB2P07550 413 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.134e-9■■■□□ 17.6
R3HDM1-213ENST00000463230 NRIP1P48552 1158 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 ASIC1P78348 528 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 COASYQ13057 564 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 UNC13DQ70J99 1090 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 ADGRD2Q7Z7M1 963 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 PPFIBP1Q86W92 1011 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 ZBTB45Q96K62 511 aaPredicted RBP14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 CLDND1Q9NY35 253 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 ADAM28Q9UKQ2 775 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 PRG3Q9Y2Y8 225 aaPredicted RBP14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 SF3B1O75533 1304 aaKnown RBP eCLIP14.26□□□□□ -0.133e-6■■■■■ 102.4
R3HDM1-213ENST00000463230 MYO7AQ13402 2215 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 TRIP11Q15643 1979 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 SMIM28A0A1B0GU29 152 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 KIAA0391O15091 583 aaKnown RBP14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 EIF3DO15371 548 aaKnown RBP eCLIP14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 CXCL14O95715 111 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 PFKFB1P16118 471 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 CEP120Q8N960 986 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 VN1R3Q9BXE9 311 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 EMILIN2Q9BXX0 1053 aa14.26□□□□□ -0.13
R3HDM1-213ENST00000463230 XPOTO43592 962 aaKnown RBP14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 GCNT3O95395 438 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 URODP06132 367 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 RPL9P32969 192 aaKnown RBP14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 ZC2HC1CQ53FD0 456 aaPredicted RBP14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 SLC39A4Q6P5W5 647 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 PDXDC1Q6P996 788 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 DCLRE1AQ6PJP8 1040 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 CCDC34Q96HJ3 373 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 MSTO1Q9BUK6 570 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 MRPL17Q9NRX2 175 aaKnown RBP14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 ACTN4O43707 911 aaKnown RBP14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 FAM189A1O60320 539 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 HARSP12081 509 aaKnown RBP14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 GARTP22102 1010 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 KCNA5P22460 613 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 GLUD2P49448 558 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 KCNC3Q14003 757 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 PTPN14Q15678 1187 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 FUT10Q6P4F1 479 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 CASP10Q92851 521 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 HAPLN2Q9GZV7 340 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 SSUH2Q9Y2M2 353 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 DERAQ9Y315 318 aa14.25□□□□□ -0.13
R3HDM1-213ENST00000463230 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 TTC26A0AVF1 554 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 LILRB3O75022 631 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 TADA2AO75478 443 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 CYP3A5P20815 502 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 PAX3P23760 479 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 LTBRP36941 435 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 ANP32AP39687 249 aaKnown RBP14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 SYKP43405 635 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 SNRPFP62306 86 aaKnown RBP14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 DSG1Q02413 1049 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 PPP2R3AQ06190 1150 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 EHHADHQ08426 723 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 SLC10A6Q3KNW5 377 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 USP41Q3LFD5 358 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 IGFLR1Q9H665 355 aa14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 RPF1Q9H9Y2 349 aaKnown RBP14.24□□□□□ -0.13
R3HDM1-213ENST00000463230 CHST7Q9NS84 486 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms