RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PRDM5Q9NQX1 630 aaPredicted RBP15.58■□□□□ 0.08
COL6A1-202ENST00000463060 IFNKQ9P0W0 207 aa15.58■□□□□ 0.08
COL6A1-202ENST00000463060 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL6A1-202ENST00000463060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-202ENST00000463060 MEIS3P2A8K0S8 358 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 TNRC18O15417 2968 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-202ENST00000463060 TEX33O43247 280 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 IL18RAPO95256 599 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 EOMESO95936 686 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 SERPINC1P01008 464 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 TRIM49P0CI25 452 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 TRIM49CP0CI26 452 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 SKIP12755 728 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 CSF2RAP15509 400 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 GTF2H1P32780 548 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 PBX1P40424 430 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 ZNF75DP51815 510 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 SURF1Q15526 300 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 ZBTB6Q15916 424 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 CNKSR3Q6P9H4 555 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 AGMOQ6ZNB7 445 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 C16orf59Q7L2K0 433 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 DEFB128Q7Z7B8 93 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 CREBRFQ8IUR6 639 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 CD302Q8IX05 232 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 TMEM199Q8N511 208 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 ANKRD20A12PQ8NF67 263 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 SNX27Q96L92 541 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 TRIM6Q9C030 488 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-202ENST00000463060 XPO4Q9C0E2 1151 aaKnown RBP15.57■□□□□ 0.08
COL6A1-202ENST00000463060 C1orf112Q9NSG2 853 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 PTPRJQ12913 1337 aa15.57■□□□□ 0.08
COL6A1-202ENST00000463060 INPPL1O15357 1258 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 RECQL4O94761 1208 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 AFPP02771 609 aaKnown RBP15.56■□□□□ 0.08
COL6A1-202ENST00000463060 C4BPAP04003 597 aaKnown RBP15.56■□□□□ 0.08
COL6A1-202ENST00000463060 PRKCSHP14314 528 aaPredicted RBP15.56■□□□□ 0.08
COL6A1-202ENST00000463060 KCNE1P15382 129 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 AKAP5P24588 427 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 FMO5P49326 533 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 EFCAB13Q8IY85 973 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 C7orf61Q8IZ16 206 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 GSTCDQ8NEC7 633 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 CCDC127Q96BQ5 260 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 ZMAT2Q96NC0 199 aaKnown RBP15.56■□□□□ 0.08
COL6A1-202ENST00000463060 CGRRF1Q99675 332 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 TMEM117Q9H0C3 514 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 ELAC1Q9H777 363 aaKnown RBP15.56■□□□□ 0.08
COL6A1-202ENST00000463060 CNTN3Q9P232 1028 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 COQ4Q9Y3A0 265 aa15.56■□□□□ 0.08
COL6A1-202ENST00000463060 CITO14578 2027 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 TTC3P53804 2025 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 TRIP11Q15643 1979 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 GTPBP10A4D1E9 387 aaKnown RBP15.55■□□□□ 0.08
COL6A1-202ENST00000463060 PFKMP08237 780 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 ITGA4P13612 1032 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 ZACNQ401N2 412 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 CBWD6Q4V339 395 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 CBWD3Q5JTY5 395 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 CBWD5Q5RIA9 395 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 DPY19L2P1Q6NXN4 242 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 SV2AQ7L0J3 742 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 WDR49Q8IV35 697 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 RPUSD2Q8IZ73 545 aaKnown RBP15.55■□□□□ 0.08
COL6A1-202ENST00000463060 OR5B17Q8NGF7 314 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 LMO3Q8TAP4 145 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 CXorf38Q8TB03 319 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 MRFAP1L1Q96HT8 127 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 FAM84AQ96KN4 292 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 ERGIC2Q96RQ1 377 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 TSPAN18Q96SJ8 248 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 TRIM5Q9C035 493 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 TMEM8AQ9HCN3 771 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 IL23AQ9NPF7 189 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 TOPORSQ9NS56 1045 aaPredicted RBP15.55■□□□□ 0.08
COL6A1-202ENST00000463060 RNF19AQ9NV58 838 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 PCDH10Q9P2E7 1040 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 GIT1Q9Y2X7 761 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 DERAQ9Y315 318 aa15.55■□□□□ 0.08
COL6A1-202ENST00000463060 RALGAPA2Q2PPJ7 1873 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 LTBP2Q14767 1821 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 SMIM28A0A1B0GU29 152 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 ABHD14A-ACY1A0A1B0GW23 586 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 PTGESO14684 152 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 P4HA2O15460 535 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 CBFA2T2O43439 604 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 EVI5O60447 810 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 STX10O60499 249 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 ADCY5O95622 1261 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 DLATP10515 647 aaKnown RBP15.54■□□□□ 0.08
COL6A1-202ENST00000463060 GCLMP48507 274 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 AP3M2P53677 418 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 YARSP54577 528 aaKnown RBP15.54■□□□□ 0.08
COL6A1-202ENST00000463060 KCNMA1Q12791 1236 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 IKBKEQ14164 716 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 FILIP1LQ4L180 1135 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 DCAF17Q5H9S7 520 aaPredicted RBP15.54■□□□□ 0.08
COL6A1-202ENST00000463060 TCERG1LQ5VWI1 586 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 SCARA3Q6AZY7 606 aa15.54■□□□□ 0.08
COL6A1-202ENST00000463060 JADE1Q6IE81 842 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms