RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 TRPS1Q9UHF7 1281 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 DDX20Q9UHI6 824 aaKnown RBP3.81□□□□□ -1.8
HDAC6-212ENST00000461608 CDC42EP3Q9UKI2 254 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 FAM184BQ9ULE4 1060 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 L1RE1Q9UN81 338 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 RIPOR2Q9Y4F9 1068 aa3.81□□□□□ -1.8
HDAC6-212ENST00000461608 A0A088AWK7 358 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 DDX3XO00571 662 aaKnown RBP eCLIP3.8□□□□□ -1.8
HDAC6-212ENST00000461608 PHGDHO43175 533 aaKnown RBP3.8□□□□□ -1.8
HDAC6-212ENST00000461608 ITGA10O75578 1167 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 TOX4O94842 621 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 GUCY1A2P33402 732 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 SREBF1P36956 1147 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 MAP2K6P52564 334 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 RAB1AP62820 205 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 DSC2Q02487 901 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 PTH1RQ03431 593 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 BTKQ06187 659 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 IFIT5Q13325 482 aaKnown RBP3.8□□□□□ -1.8
HDAC6-212ENST00000461608 ADAM15Q13444 863 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 SEMA5AQ13591 1074 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 MORC3Q14149 939 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 SAFB2Q14151 953 aaKnown RBP eCLIP3.8□□□□□ -1.8
HDAC6-212ENST00000461608 GALEQ14376 348 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 UBE3CQ15386 1083 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 KIAA0753Q2KHM9 967 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 BORAQ6PGQ7 559 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 NPNTQ6UXI9 565 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 ABHD15Q6UXT9 468 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 GADL1Q6ZQY3 521 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 RSPH3Q86UC2 560 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 SMC5Q8IY18 1101 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 PQLC1Q8N2U9 271 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 FAM156AQ8NDB6 213 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 KLHDC4Q8TBB5 520 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 BRIX1Q8TDN6 353 aaKnown RBP3.8□□□□□ -1.8
HDAC6-212ENST00000461608 ADAMTS17Q8TE56 1095 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 LRTOMTQ8WZ04 291 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 GJA10Q969M2 543 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 STRBPQ96SI9 672 aaKnown RBP3.8□□□□□ -1.8
HDAC6-212ENST00000461608 CDK5RAP1Q96SZ6 601 aaKnown RBP3.8□□□□□ -1.8
HDAC6-212ENST00000461608 CDC5LQ99459 802 aaKnown RBP3.8□□□□□ -1.8
HDAC6-212ENST00000461608 ELAC2Q9BQ52 826 aaKnown RBP3.8□□□□□ -1.8
HDAC6-212ENST00000461608 SYT3Q9BQG1 590 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 SELENOOQ9BVL4 669 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 KLHL11Q9NVR0 708 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 SIDT1Q9NXL6 827 aaKnown RBP3.8□□□□□ -1.8
HDAC6-212ENST00000461608 NR2E3Q9Y5X4 410 aa3.8□□□□□ -1.8
HDAC6-212ENST00000461608 PMM2O15305 246 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 ARHGAP6O43182 974 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 ADCY6O43306 1168 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 ALDH2P05091 517 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 ITGB3P05106 788 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 PEX2P28328 305 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 SLC6A9P48067 706 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 TM4SF4P48230 202 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 FLT3LGP49771 235 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 AK2P54819 239 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 RRADP55042 308 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 ZNF280AP59817 542 aaPredicted RBP3.79□□□□□ -1.8
HDAC6-212ENST00000461608 KIAA2012Q0VF49 1180 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 IL10RAQ13651 578 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 FGL2Q14314 439 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 SEPT2Q15019 361 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 CNN3Q15417 329 aaKnown RBP3.79□□□□□ -1.8
HDAC6-212ENST00000461608 SURF1Q15526 300 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 RNF220Q5VTB9 566 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 Q6ZVL8 140 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 ZNF572Q7Z3I7 529 aaPredicted RBP3.79□□□□□ -1.8
HDAC6-212ENST00000461608 EXOC8Q8IYI6 725 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 MSL3Q8N5Y2 521 aaKnown RBP3.79□□□□□ -1.8
HDAC6-212ENST00000461608 TXNDC5Q8NBS9 432 aaKnown RBP3.79□□□□□ -1.8
HDAC6-212ENST00000461608 OR2I1PQ8NGU4 316 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 PPP1R35Q8TAP8 253 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 RABGGTAQ92696 567 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 KAT5Q92993 513 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 DVL3Q92997 716 aaPredicted RBP3.79□□□□□ -1.8
HDAC6-212ENST00000461608 SLC35A4Q96G79 324 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 TMX3Q96JJ7 454 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 CLPTM1LQ96KA5 538 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 MRGPRX4Q96LA9 322 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 C8orf49Q96NF6 230 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 CHMP4AQ9BY43 222 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 SCAND2PQ9GZW5 306 aaPredicted RBP3.79□□□□□ -1.8
HDAC6-212ENST00000461608 SARS2Q9NP81 518 aaKnown RBP3.79□□□□□ -1.8
HDAC6-212ENST00000461608 NLRC4Q9NPP4 1024 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 LMBRD1Q9NUN5 540 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 RLIMQ9NVW2 624 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 PUF60Q9UHX1 559 aaKnown RBP3.79□□□□□ -1.8
HDAC6-212ENST00000461608 MAGEL2Q9UJ55 1249 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 PADI4Q9UM07 663 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 PCDHB1Q9Y5F3 818 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 RBM8AQ9Y5S9 174 aaKnown RBP3.79□□□□□ -1.8
HDAC6-212ENST00000461608 SLC4A7Q9Y6M7 1214 aa3.79□□□□□ -1.8
HDAC6-212ENST00000461608 MYBBP1AQ9BQG0 1328 aaKnown RBP3.78□□□□□ -1.8
HDAC6-212ENST00000461608 A0A1W2PPL8 197 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 MROH6A6NGR9 719 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 A6NNZ2 444 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 ISM1B1AKI9 464 aa3.78□□□□□ -1.8
HDAC6-212ENST00000461608 TYRP14679 529 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms