RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 SPECC1Q5M775 1068 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 FAM171A1Q5VUB5 890 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 ARL6IP4Q66PJ3 421 aaKnown RBP17.03■□□□□ 0.32
NUP50-213ENST00000461437 GPR149Q86SP6 731 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 DRC1Q96MC2 740 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 NECTIN4Q96NY8 510 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 MRPL4Q9BYD3 311 aaKnown RBP17.03■□□□□ 0.32
NUP50-213ENST00000461437 BACH2Q9BYV9 841 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 PTPRHQ9HD43 1115 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 CLIC4Q9Y696 253 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 ZDBF2Q9HCK1 2354 aa17.03■□□□□ 0.32
NUP50-213ENST00000461437 ABLIM1O14639 778 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 ADAM12O43184 909 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 TGM5O43548 720 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 PDGFBP01127 241 aaPredicted RBP17.02■□□□□ 0.32
NUP50-213ENST00000461437 PLCG1P19174 1290 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 CLCNKBP51801 687 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 CEBPZQ03701 1054 aaKnown RBP17.02■□□□□ 0.32
NUP50-213ENST00000461437 MCM6Q14566 821 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 CD300LGQ6UXG3 332 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 USP49Q70CQ1 688 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 TDRD5Q8NAT2 981 aaKnown RBP17.02■□□□□ 0.32
NUP50-213ENST00000461437 KREMEN2Q8NCW0 462 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 C3orf58Q8NDZ4 430 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 ST13P5Q8NFI4 369 aaPredicted RBP17.02■□□□□ 0.32
NUP50-213ENST00000461437 ZMAT2Q96NC0 199 aaKnown RBP17.02■□□□□ 0.32
NUP50-213ENST00000461437 PPP1R10Q96QC0 940 aaKnown RBP17.02■□□□□ 0.32
NUP50-213ENST00000461437 TCHPQ9BT92 498 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 NT5C3AQ9H0P0 336 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 TMEM134Q9H6X4 195 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 BLOC1S4Q9NUP1 217 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 ANKFY1Q9P2R3 1169 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 STK39Q9UEW8 545 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 LIMD1Q9UGP4 676 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 NR2E1Q9Y466 385 aa17.02■□□□□ 0.32
NUP50-213ENST00000461437 WDFY4Q6ZS81 3184 aa17.02■□□□□ 0.31
NUP50-213ENST00000461437 SF3B1O75533 1304 aaKnown RBP eCLIP17.01■□□□□ 0.31
NUP50-213ENST00000461437 CCDC195A0A1B0GUA6 201 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 BRD1O95696 1058 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 PLS3P13797 630 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 MARCKSP29966 332 aaPredicted RBP17.01■□□□□ 0.31
NUP50-213ENST00000461437 GRM5P41594 1212 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 BRCC3P46736 316 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 RESTQ13127 1097 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 TMEM161BQ8NDZ6 487 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 PBXIP1Q96AQ6 731 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 REEP2Q9BRK0 252 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 HAPLN2Q9GZV7 340 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 SSX2IPQ9Y2D8 614 aa17.01■□□□□ 0.31
NUP50-213ENST00000461437 SMIM28A0A1B0GU29 152 aa17■□□□□ 0.31
NUP50-213ENST00000461437 N4BP1O75113 896 aaKnown RBP17■□□□□ 0.31
NUP50-213ENST00000461437 MAPTP10636 758 aaKnown RBP17■□□□□ 0.31
NUP50-213ENST00000461437 PROZP22891 400 aa17■□□□□ 0.31
NUP50-213ENST00000461437 UBA7P41226 1012 aa17■□□□□ 0.31
NUP50-213ENST00000461437 SPAG1Q07617 926 aa17■□□□□ 0.31
NUP50-213ENST00000461437 CCDC149Q6ZUS6 474 aa17■□□□□ 0.31
NUP50-213ENST00000461437 BRAPQ7Z569 592 aa17■□□□□ 0.31
NUP50-213ENST00000461437 RASSF8Q8NHQ8 419 aa17■□□□□ 0.31
NUP50-213ENST00000461437 LNX1Q8TBB1 728 aaPredicted RBP17■□□□□ 0.31
NUP50-213ENST00000461437 C18orf25Q96B23 403 aaPredicted RBP17■□□□□ 0.31
NUP50-213ENST00000461437 ZNF707Q96C28 371 aaPredicted RBP17■□□□□ 0.31
NUP50-213ENST00000461437 ASIC4Q96FT7 647 aa17■□□□□ 0.31
NUP50-213ENST00000461437 CALML4Q96GE6 196 aa17■□□□□ 0.31
NUP50-213ENST00000461437 SNX27Q96L92 541 aa17■□□□□ 0.31
NUP50-213ENST00000461437 NOTCH4Q99466 2003 aa17■□□□□ 0.31
NUP50-213ENST00000461437 CLSTN3Q9BQT9 956 aa17■□□□□ 0.31
NUP50-213ENST00000461437 TTPALQ9BTX7 342 aa17■□□□□ 0.31
NUP50-213ENST00000461437 CCDC94Q9BW85 323 aaPredicted RBP17■□□□□ 0.31
NUP50-213ENST00000461437 B3GAT3O94766 335 aa16.99■□□□□ 0.31
NUP50-213ENST00000461437 SYT1P21579 422 aa16.99■□□□□ 0.31
NUP50-213ENST00000461437 TKTP29401 623 aaKnown RBP16.99■□□□□ 0.31
NUP50-213ENST00000461437 YARSP54577 528 aaKnown RBP16.99■□□□□ 0.31
NUP50-213ENST00000461437 SIGLEC14Q08ET2 396 aa16.99■□□□□ 0.31
NUP50-213ENST00000461437 PTPAQ15257 358 aa16.99■□□□□ 0.31
NUP50-213ENST00000461437 PSMD5Q16401 504 aa16.99■□□□□ 0.31
NUP50-213ENST00000461437 MPZL3Q6UWV2 235 aa16.99■□□□□ 0.31
NUP50-213ENST00000461437 RSPO2Q6UXX9 243 aaPredicted RBP16.99■□□□□ 0.31
NUP50-213ENST00000461437 SMG7Q92540 1137 aaKnown RBP16.99■□□□□ 0.31
NUP50-213ENST00000461437 EPSTI1Q96J88 318 aa16.99■□□□□ 0.31
NUP50-213ENST00000461437 CLIC6Q96NY7 704 aa16.99■□□□□ 0.31
NUP50-213ENST00000461437 ZHX3Q9H4I2 956 aa16.99■□□□□ 0.31
NUP50-213ENST00000461437 RBM19Q9Y4C8 960 aaKnown RBP16.99■□□□□ 0.31
NUP50-213ENST00000461437 MCF2P10911 925 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 MATR3P43243 847 aaKnown RBP eCLIP16.98■□□□□ 0.31
NUP50-213ENST00000461437 VCPP55072 806 aaKnown RBP16.98■□□□□ 0.31
NUP50-213ENST00000461437 STRN3Q13033 797 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 IER5LQ5T953 404 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 LILRA6Q6PI73 481 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 ALKAL1Q6UXT8 129 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 SPIRE2Q8WWL2 714 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 PIK3R5Q8WYR1 880 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 RAD54LQ92698 747 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 AK8Q96MA6 479 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 ACAP3Q96P50 834 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 NTPCRQ9BSD7 190 aaKnown RBP16.98■□□□□ 0.31
NUP50-213ENST00000461437 TIPINQ9BVW5 301 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 C17orf75Q9HAS0 396 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 FNIP2Q9P278 1114 aa16.98■□□□□ 0.31
NUP50-213ENST00000461437 K7ENM7 598 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms