RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 ODF2LQ9ULJ1 636 aa20.22■□□□□ 0.83
COL9A2-205ENST00000461118 MYH11P35749 1972 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 POMCP01189 267 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 ALDH2P05091 517 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 MLH1P40692 756 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 CLCN4P51793 760 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 SMTNP53814 917 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 RAD51AP2Q09MP3 1159 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 BMS1Q14692 1282 aaKnown RBP20.21■□□□□ 0.83
COL9A2-205ENST00000461118 TAS1R3Q7RTX0 852 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 FRMD5Q7Z6J6 570 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 KRI1Q8N9T8 703 aaKnown RBP20.21■□□□□ 0.83
COL9A2-205ENST00000461118 LINC00301Q8NCQ3 95 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 GSTCDQ8NEC7 633 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 KCNN1Q92952 543 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 ZFP42Q96MM3 310 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 ZNF396Q96N95 335 aaPredicted RBP20.21■□□□□ 0.83
COL9A2-205ENST00000461118 CLIC6Q96NY7 704 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 KLHL5Q96PQ7 755 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 ADPGKQ9BRR6 497 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 GBP3Q9H0R5 595 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 MIOSQ9NXC5 875 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 TNFSF13BQ9Y275 285 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 USP20Q9Y2K6 914 aa20.21■□□□□ 0.83
COL9A2-205ENST00000461118 FANCMQ8IYD8 2048 aa20.2■□□□□ 0.83
COL9A2-205ENST00000461118 LIG1P18858 919 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 AKAP5P24588 427 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 DSC1Q08554 894 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 MCM6Q14566 821 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 TMEM132AQ24JP5 1023 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 DCAF4L1Q3SXM0 396 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 SPECC1Q5M775 1068 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 ATF7IP2Q5U623 682 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 EEF1DP3Q658K8 133 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 GPBP1Q86WP2 473 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 COLGALT2Q8IYK4 626 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 RASSF8Q8NHQ8 419 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 LARP4BQ92615 738 aaKnown RBP20.2■□□□□ 0.82
COL9A2-205ENST00000461118 FAM193BQ96PV7 902 aaPredicted RBP20.2■□□□□ 0.82
COL9A2-205ENST00000461118 ACO2Q99798 780 aaKnown RBP20.2■□□□□ 0.82
COL9A2-205ENST00000461118 APOL6Q9BWW8 343 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 SFXN1Q9H9B4 322 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 LARSQ9P2J5 1176 aaKnown RBP20.2■□□□□ 0.82
COL9A2-205ENST00000461118 STK39Q9UEW8 545 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 CCDC39Q9UFE4 941 aa20.2■□□□□ 0.82
COL9A2-205ENST00000461118 MYH15Q9Y2K3 1946 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 DOCK6Q96HP0 2047 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 NPHP3-ACAD11A0A0J9YXS1 232 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 SLC16A4O15374 487 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 N4BP1O75113 896 aaKnown RBP20.19■□□□□ 0.82
COL9A2-205ENST00000461118 F13A1P00488 732 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 CNPP09543 421 aaKnown RBP20.19■□□□□ 0.82
COL9A2-205ENST00000461118 AOC1P19801 751 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 SCNN1GP51170 649 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 APBB1IPQ7Z5R6 666 aaPredicted RBP20.19■□□□□ 0.82
COL9A2-205ENST00000461118 PPFIBP1Q86W92 1011 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 TMEM161BQ8NDZ6 487 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 REEP2Q9BRK0 252 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 MRPL4Q9BYD3 311 aaKnown RBP20.19■□□□□ 0.82
COL9A2-205ENST00000461118 PTPRHQ9HD43 1115 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 TFIP11Q9UBB9 837 aaKnown RBP20.19■□□□□ 0.82
COL9A2-205ENST00000461118 STK17AQ9UEE5 414 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 PARP2Q9UGN5 583 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 FAN1Q9Y2M0 1017 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 DMXL1Q9Y485 3027 aa20.19■□□□□ 0.82
COL9A2-205ENST00000461118 NRP1O14786 923 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 PPP6R2O75170 966 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 YEATS4O95619 227 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 EFEMP2O95967 443 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 SCP2P22307 547 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 TXLNAP40222 546 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 ZNF131P52739 623 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 TDGQ13569 410 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 STK38Q15208 465 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 MFSD1Q9H3U5 465 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 KCNK12Q9HB15 430 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 SNTG2Q9NY99 539 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 DUSP12Q9UNI6 340 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 CACNA1AO00555 2505 aa20.18■□□□□ 0.82
COL9A2-205ENST00000461118 H0YCG3 227 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 SPTLC2O15270 562 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 MAPTP10636 758 aaKnown RBP20.17■□□□□ 0.82
COL9A2-205ENST00000461118 PROZP22891 400 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 NCKAP1LP55160 1127 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 FOXK2Q01167 660 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 CACNB1Q02641 598 aaPredicted RBP20.17■□□□□ 0.82
COL9A2-205ENST00000461118 GRIK3Q13003 919 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 DHX8Q14562 1220 aaKnown RBP20.17■□□□□ 0.82
COL9A2-205ENST00000461118 ATL3Q6DD88 541 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 C15orf39Q6ZRI6 1047 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 CCDC149Q6ZUS6 474 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 OTOP3Q7RTS5 596 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 CCDC105Q8IYK2 499 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 RNF168Q8IYW5 571 aaPredicted RBP20.17■□□□□ 0.82
COL9A2-205ENST00000461118 SPRYD3Q8NCJ5 442 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 FLCNQ8NFG4 579 aa20.17■□□□□ 0.82
COL9A2-205ENST00000461118 STRN3Q13033 797 aa20.16■□□□□ 0.82
COL9A2-205ENST00000461118 PKP1Q13835 747 aa20.16■□□□□ 0.82
COL9A2-205ENST00000461118 RRAGBQ5VZM2 374 aa20.16■□□□□ 0.82
COL9A2-205ENST00000461118 TMEM87AQ8NBN3 555 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms