RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 DSG1Q02413 1049 aa15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 LMNB2Q03252 620 aa15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 KIAA0319Q5VV43 1072 aa15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 RHPN2Q8IUC4 686 aa15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 ASAP3Q8TDY4 903 aa15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 SNX29Q8TEQ0 813 aa15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 TCP11Q8WWU5 503 aa15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 SMG7Q92540 1137 aaKnown RBP15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 NELL1Q92832 810 aa15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 KIAA1024Q9UPX6 916 aa15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 FAN1Q9Y2M0 1017 aa15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 PCDHB2Q9Y5E7 798 aa15.09■□□□□ 0.01
SCAMP4-206ENST00000460767 VWA3AA6NCI4 1184 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 LILRB5O75023 590 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 HOXA11P31270 313 aaPredicted RBP15.08■□□□□ 0
SCAMP4-206ENST00000460767 PRKCQQ04759 706 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 DSC1Q08554 894 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 CAPSQ13938 189 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 MXD4Q14582 209 aaPredicted RBP15.08■□□□□ 0
SCAMP4-206ENST00000460767 SLC39A14Q15043 492 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 AMHR2Q16671 573 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 SPECC1Q5M775 1068 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 VARS2Q5ST30 1063 aaKnown RBP15.08■□□□□ 0
SCAMP4-206ENST00000460767 CDCA2Q69YH5 1023 aaPredicted RBP15.08■□□□□ 0
SCAMP4-206ENST00000460767 RSPO2Q6UXX9 243 aaPredicted RBP15.08■□□□□ 0
SCAMP4-206ENST00000460767 ZBTB44Q8NCP5 570 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 CNNM3Q8NE01 707 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 MCPH1Q8NEM0 835 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 NT5C3AQ9H0P0 336 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 GBP3Q9H0R5 595 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 EPC1Q9H2F5 836 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 UBN1Q9NPG3 1134 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.08■□□□□ 0
SCAMP4-206ENST00000460767 CHST7Q9NS84 486 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 DDX19AQ9NUU7 478 aaKnown RBP15.08■□□□□ 0
SCAMP4-206ENST00000460767 ZDHHC9Q9Y397 364 aa15.08■□□□□ 0
SCAMP4-206ENST00000460767 SRPRBQ9Y5M8 271 aaKnown RBP15.08■□□□□ 0
SCAMP4-206ENST00000460767 CACNA1IQ9P0X4 2223 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 KANSL1LA0AUZ9 987 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 SSBP05455 408 aaKnown RBP eCLIP15.07■□□□□ 0
SCAMP4-206ENST00000460767 ZSCAN22P10073 491 aaPredicted RBP15.07■□□□□ 0
SCAMP4-206ENST00000460767 LONP1P36776 959 aaKnown RBP15.07■□□□□ 0
SCAMP4-206ENST00000460767 ATXN1P54253 815 aaKnown RBP15.07■□□□□ 0
SCAMP4-206ENST00000460767 MAPK7Q13164 816 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 PCBP1Q15365 356 aaKnown RBP eCLIP15.07■□□□□ 0
SCAMP4-206ENST00000460767 KRT79Q5XKE5 535 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 PADI6Q6TGC4 694 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 C1orf186Q6ZWK4 172 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 CATSPER4Q7RTX7 472 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 SRGAP1Q7Z6B7 1085 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 COLGALT2Q8IYK4 626 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 DAW1Q8N136 415 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 KCNN1Q92952 543 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 FAM193BQ96PV7 902 aaPredicted RBP15.07■□□□□ 0
SCAMP4-206ENST00000460767 RTKNQ9BST9 563 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 BCO2Q9BYV7 579 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 PRKD2Q9BZL6 878 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 CCSER1Q9C0I3 900 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 BHMT2Q9H2M3 363 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 GPRC5CQ9NQ84 441 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 BMP2KQ9NSY1 1161 aaPredicted RBP15.07■□□□□ 0
SCAMP4-206ENST00000460767 FNIP2Q9P278 1114 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 NCDNQ9UBB6 729 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 NUMBLQ9Y6R0 609 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 EPG5Q9HCE0 2579 aa15.07■□□□□ 0
SCAMP4-206ENST00000460767 E9PMD0 336 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 USO1O60763 962 aaKnown RBP15.06■□□□□ 0
SCAMP4-206ENST00000460767 RFPL2O75678 378 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 F13A1P00488 732 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 NCLP19338 710 aaKnown RBP15.06■□□□□ 0
SCAMP4-206ENST00000460767 DDIT3P35638 169 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 SLC12A3P55017 1021 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 CREMQ03060 361 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 MBTD1Q05BQ5 628 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 UBXN11Q5T124 520 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 LILRA6Q6PI73 481 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 RNF149Q8NC42 400 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 LINC00301Q8NCQ3 95 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 BSNDQ8WZ55 320 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 SECISBP2LQ93073 1101 aaKnown RBP15.06■□□□□ 0
SCAMP4-206ENST00000460767 NLRP4Q96MN2 994 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 FOXQ1Q9C009 403 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 BLOC1S4Q9NUP1 217 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 ZMYM2Q9UBW7 1377 aa15.06■□□□□ 0
SCAMP4-206ENST00000460767 TDRD15B5MCY1 1934 aaKnown RBP15.05■□□□□ 0
SCAMP4-206ENST00000460767 LAMTOR5O43504 91 aa15.05■□□□□ -0
SCAMP4-206ENST00000460767 AFF1P51825 1210 aaKnown RBP15.05■□□□□ -0
SCAMP4-206ENST00000460767 LONRF3Q496Y0 759 aa15.05■□□□□ -0
SCAMP4-206ENST00000460767 RINT1Q6NUQ1 792 aa15.05■□□□□ -0
SCAMP4-206ENST00000460767 USP49Q70CQ1 688 aa15.05■□□□□ -0
SCAMP4-206ENST00000460767 GET4Q7L5D6 327 aaPredicted RBP15.05■□□□□ -0
SCAMP4-206ENST00000460767 SYT2Q8N9I0 419 aaPredicted RBP15.05■□□□□ -0
SCAMP4-206ENST00000460767 RUSC1Q9BVN2 902 aa15.05■□□□□ -0
SCAMP4-206ENST00000460767 POLR3FQ9H1D9 316 aaPredicted RBP15.05■□□□□ -0
SCAMP4-206ENST00000460767 ZSCAN32Q9NX65 697 aa15.05■□□□□ -0
SCAMP4-206ENST00000460767 DNM3Q9UQ16 869 aa15.05■□□□□ -0
SCAMP4-206ENST00000460767 ARHGEF35A5YM69 484 aa15.04■□□□□ -0
SCAMP4-206ENST00000460767 C2CD2LO14523 706 aa15.04■□□□□ -0
SCAMP4-206ENST00000460767 TGM5O43548 720 aa15.04■□□□□ -0
SCAMP4-206ENST00000460767 ZMYND10O75800 440 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms