RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 HSPA6P17066 643 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 DDCP20711 480 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 GDF5P43026 501 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 IRX6P78412 446 aaPredicted RBP4.3□□□□□ -1.72
VPS8-215ENST00000460158 ATP8B2P98198 1209 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 CDC42EP1Q00587 391 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 U2AF1Q01081 240 aaKnown RBP eCLIP4.3□□□□□ -1.72
VPS8-215ENST00000460158 ICAM4Q14773 271 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 PGS1Q32NB8 556 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 AFMIDQ63HM1 303 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 ANKS6Q68DC2 871 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 PPP4R3AQ6IN85 833 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 RSPH3Q86UC2 560 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 XYLT1Q86Y38 959 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 DRC7Q8IY82 874 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 D2HGDHQ8N465 521 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 DNERQ8NFT8 737 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 NSUN6Q8TEA1 469 aaKnown RBP4.3□□□□□ -1.72
VPS8-215ENST00000460158 DIS3LQ8TF46 1054 aaKnown RBP4.3□□□□□ -1.72
VPS8-215ENST00000460158 CYFIP2Q96F07 1278 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 TMX3Q96JJ7 454 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 CLPTM1LQ96KA5 538 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 TAAR9Q96RI9 348 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 MAP3K14Q99558 947 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 KCNH6Q9H252 994 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 TMEM140Q9NV12 185 aa4.3□□□□□ -1.72
VPS8-215ENST00000460158 CFAP20Q9Y6A4 193 aaKnown RBP4.3□□□□□ -1.72
VPS8-215ENST00000460158 LRRC14BA6NHZ5 514 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 VSTM5A8MXK1 200 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 CYR61O00622 381 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 TPD52L2O43399 206 aaKnown RBP4.29□□□□□ -1.72
VPS8-215ENST00000460158 SGTAO43765 313 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 ZNF623O75123 536 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 GPR32O75388 356 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 ALDH2P05091 517 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 RAP2AP10114 183 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 MYBP10242 640 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 C6P13671 934 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 ATF3P18847 181 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 TACR2P21452 398 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 ALDH1A3P47895 512 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 FLT3LGP49771 235 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 SP140Q13342 867 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 MTM1Q13496 603 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 ELAVL1Q15717 326 aaKnown RBP4.29□□□□□ -1.72
VPS8-215ENST00000460158 MINDY4Q4G0A6 757 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 FAM47AQ5JRC9 791 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 SPTY2D1Q68D10 685 aaPredicted RBP4.29□□□□□ -1.72
VPS8-215ENST00000460158 POLNQ7Z5Q5 900 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 TTC7BQ86TV6 843 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 ELOA2Q8IYF1 753 aaPredicted RBP4.29□□□□□ -1.72
VPS8-215ENST00000460158 EXOC8Q8IYI6 725 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 SLC35B2Q8TB61 432 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 IFI44Q8TCB0 444 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 Q8TCH9 128 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 RUNDC1Q96C34 613 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 MRGPRX4Q96LA9 322 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 WWC2-AS2Q96NR7 200 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 ACO2Q99798 780 aaKnown RBP4.29□□□□□ -1.72
VPS8-215ENST00000460158 VRK1Q99986 396 aaPredicted RBP4.29□□□□□ -1.72
VPS8-215ENST00000460158 LSM14BQ9BX40 385 aaKnown RBP4.29□□□□□ -1.72
VPS8-215ENST00000460158 RUVBL1Q9Y265 456 aaKnown RBP4.29□□□□□ -1.72
VPS8-215ENST00000460158 TSC22D4Q9Y3Q8 395 aa4.29□□□□□ -1.72
VPS8-215ENST00000460158 GOLGA6CA6NDK9 693 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 GOLGA6BA6NDN3 693 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 CXorf49A8MYA2 514 aaPredicted RBP4.28□□□□□ -1.72
VPS8-215ENST00000460158 CTNND1O60716 968 aaKnown RBP4.28□□□□□ -1.72
VPS8-215ENST00000460158 GOLGA6DP0CG33 693 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 IL2RBP14784 551 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 GNAT2P19087 354 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 COMTP21964 271 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 MAP2K6P52564 334 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 HMGA2P52926 109 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 ZNF280AP59817 542 aaPredicted RBP4.28□□□□□ -1.72
VPS8-215ENST00000460158 GFOD2Q3B7J2 385 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 KHDC1Q4VXA5 237 aaKnown RBP4.28□□□□□ -1.72
VPS8-215ENST00000460158 MFSD5Q6N075 450 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 Q6ZSN1 163 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 ZNF808Q8N4W9 903 aaPredicted RBP4.28□□□□□ -1.72
VPS8-215ENST00000460158 DCBLD1Q8N8Z6 715 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 PPP1R35Q8TAP8 253 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 CASKIN2Q8WXE0 1202 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 RGMAQ96B86 450 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 C1GALT1C1Q96EU7 318 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 C8orf48Q96LL4 319 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 MPHOSPH9Q99550 1183 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 MYOCQ99972 504 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 CPPED1Q9BRF8 314 aaPredicted RBP4.28□□□□□ -1.72
VPS8-215ENST00000460158 CPEB1Q9BZB8 566 aaKnown RBP4.28□□□□□ -1.72
VPS8-215ENST00000460158 CD248Q9HCU0 757 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 GOLGA6AQ9NYA3 693 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 MOCS1Q9NZB8 636 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 HECAQ9UBI9 543 aaPredicted RBP4.28□□□□□ -1.72
VPS8-215ENST00000460158 DDX20Q9UHI6 824 aaKnown RBP4.28□□□□□ -1.72
VPS8-215ENST00000460158 SLC23A1Q9UHI7 598 aa4.28□□□□□ -1.72
VPS8-215ENST00000460158 PNPLA7Q6ZV29 1317 aa4.27□□□□□ -1.73
VPS8-215ENST00000460158 A0A0U1RQG5 324 aaPredicted RBP4.27□□□□□ -1.73
VPS8-215ENST00000460158 TBKBP1A7MCY6 615 aa4.27□□□□□ -1.73
VPS8-215ENST00000460158 B5MCH6 92 aa4.27□□□□□ -1.73
VPS8-215ENST00000460158 FTLP02792 175 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms