RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 PPME1Q9Y570 386 aa18.44■□□□□ 0.54
TMEM50B-205ENST00000459909 MTCL1Q9Y4B5 1905 aaKnown RBP18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 CCL16O15467 120 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 TADA2AO75478 443 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 ECI2O75521 394 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 GJB2P29033 226 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 DMWDQ09019 674 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 LAMTOR4Q0VGL1 99 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 LPAL2Q16609 132 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 RTP2Q5QGT7 225 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 NOTUMQ6P988 496 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 NPAS3Q8IXF0 933 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 HACE1Q8IYU2 909 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 IER2Q9BTL4 223 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 DHX33Q9H6R0 707 aaKnown RBP18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 SEMA4GQ9NTN9 838 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 HES2Q9Y543 173 aa18.43■□□□□ 0.54
TMEM50B-205ENST00000459909 SF3B1O75533 1304 aaKnown RBP eCLIP18.43■□□□□ 0.544e-7■■■■■ 133.7
TMEM50B-205ENST00000459909 ASAP2O43150 1006 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 ANP32AP39687 249 aaKnown RBP18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 NPEPPSP55786 919 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 NCBP1Q09161 790 aaKnown RBP18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 CSRP2Q16527 193 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 PRR23CQ6ZRP0 262 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 RNF149Q8NC42 400 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 GSTCDQ8NEC7 633 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 TMEM143Q96AN5 459 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 C8orf76Q96K31 380 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 CEP170P1Q96L14 293 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 CLSTN3Q9BQT9 956 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 CSRNP2Q9H175 543 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 CHRDQ9H2X0 955 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 HEBP1Q9NRV9 189 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 GJB4Q9NTQ9 266 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 KCNJ14Q9UNX9 436 aa18.42■□□□□ 0.54
TMEM50B-205ENST00000459909 SHISA7A6NL88 538 aa18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 FOXD2O60548 495 aaPredicted RBP18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 TSPAN1O60635 241 aa18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 DKC1O60832 514 aaKnown RBP eCLIP18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 RFC5P40937 340 aa18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 GRIK3Q13003 919 aa18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 UVSSAQ2YD98 709 aa18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 PABPC1LQ4VXU2 614 aaKnown RBP18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 PRR23BQ6ZRT6 265 aa18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 TCP11Q8WWU5 503 aa18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 PIK3R5Q8WYR1 880 aa18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 DNASE1L2Q92874 299 aa18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 INTS4Q96HW7 963 aaKnown RBP18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 TTPALQ9BTX7 342 aa18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 APOL6Q9BWW8 343 aa18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 TRIM6Q9C030 488 aaPredicted RBP18.41■□□□□ 0.54
TMEM50B-205ENST00000459909 CYP3A7-CYP3A51PA0A087WV96 503 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 MAN2B1O00754 1011 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 CYP3A7P24462 503 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 QARSP47897 775 aaKnown RBP18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 CCR3P51677 355 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 GUCY1B3Q02153 619 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 HSP90AA2PQ14568 343 aaPredicted RBP18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 PSMD5Q16401 504 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 FERMT3Q86UX7 667 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 FAM177A1Q8N128 213 aaPredicted RBP18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 SPRYD3Q8NCJ5 442 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 LNX1Q8TBB1 728 aaPredicted RBP18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 SLC7A14Q8TBB6 771 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 TBCKQ8TEA7 893 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 CPB2Q96IY4 423 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 GDE1Q9NZC3 331 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 DNMT3BQ9UBC3 853 aaKnown RBP18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 RALYQ9UKM9 306 aaKnown RBP18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 ZMYM2Q9UBW7 1377 aa18.4■□□□□ 0.54
TMEM50B-205ENST00000459909 PMLP29590 882 aa18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 PTENP60484 403 aa18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 SHC2P98077 582 aa18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 AXDND1Q5T1B0 1012 aaPredicted RBP18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 PDXDC1Q6P996 788 aa18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 RTL10Q7L3V2 364 aa18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 ZNF687Q8N1G0 1237 aa18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 ZNF579Q8NAF0 562 aaKnown RBP18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 ETNPPLQ8TBG4 499 aa18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 RABGGTAQ92696 567 aa18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 PLA2G2FQ9BZM2 168 aa18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 NXF3Q9H4D5 531 aaKnown RBP18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 HCFC1R1Q9NWW0 138 aa18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 NDRG2Q9UN36 371 aaKnown RBP18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 PCDHA4Q9UN74 947 aa18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 MRPS23Q9Y3D9 190 aaKnown RBP18.39■□□□□ 0.53
TMEM50B-205ENST00000459909 TDP2O95551 362 aa18.38■□□□□ 0.53
TMEM50B-205ENST00000459909 KCNA4P22459 653 aa18.38■□□□□ 0.53
TMEM50B-205ENST00000459909 AKAP5P24588 427 aa18.38■□□□□ 0.53
TMEM50B-205ENST00000459909 SIM2Q14190 667 aaPredicted RBP18.38■□□□□ 0.53
TMEM50B-205ENST00000459909 FAM171A1Q5VUB5 890 aa18.38■□□□□ 0.53
TMEM50B-205ENST00000459909 GALNT17Q6IS24 598 aa18.38■□□□□ 0.53
TMEM50B-205ENST00000459909 CEP57Q86XR8 500 aa18.38■□□□□ 0.53
TMEM50B-205ENST00000459909 BLIDQ8IZY5 108 aa18.38■□□□□ 0.53
TMEM50B-205ENST00000459909 ING5Q8WYH8 240 aa18.38■□□□□ 0.53
TMEM50B-205ENST00000459909 ELSPBP1Q96BH3 223 aa18.38■□□□□ 0.53
TMEM50B-205ENST00000459909 BRMS1Q9HCU9 246 aa18.38■□□□□ 0.53
TMEM50B-205ENST00000459909 H3BQV1 296 aa18.37■□□□□ 0.53
TMEM50B-205ENST00000459909 GDF9O60383 454 aa18.37■□□□□ 0.53
TMEM50B-205ENST00000459909 COL9A2Q14055 689 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms