RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CACNA1HO95180 2353 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 KMT2EQ8IZD2 1858 aa10.99□□□□□ -0.65
HDLBP-228ENST00000459788 DOCK6Q96HP0 2047 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 TTLL13PA6NNM8 815 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 PP2D1A8MPX8 630 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 TOM1L1O75674 476 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 POU2F2P09086 479 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 PLA2G4BP0C869 781 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 KCNE1P15382 129 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 RARS2Q5T160 578 aaKnown RBP10.98□□□□□ -0.65
HDLBP-228ENST00000459788 EEF1DP3Q658K8 133 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 LILRA6Q6PI73 481 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 MPZL3Q6UWV2 235 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.98□□□□□ -0.65
HDLBP-228ENST00000459788 CCDC149Q6ZUS6 474 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 KCNK18Q7Z418 384 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 CDR2LQ86X02 465 aaPredicted RBP10.98□□□□□ -0.65
HDLBP-228ENST00000459788 TDRD5Q8NAT2 981 aaKnown RBP10.98□□□□□ -0.65
HDLBP-228ENST00000459788 STAMQ92783 540 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 NXPE3Q969Y0 559 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 TTPALQ9BTX7 342 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 BACH2Q9BYV9 841 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 GPR62Q9BZJ7 368 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 CCSER1Q9C0I3 900 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 POMKQ9H5K3 350 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 SORCS3Q9UPU3 1222 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 ANK1P16157 1881 aa10.98□□□□□ -0.65
HDLBP-228ENST00000459788 FAM86C2PA6NEL3 165 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 TMEM221A6NGB7 291 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 M0R296 226 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 EDN1P05305 212 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 HNRNPA1P09651 372 aaKnown RBP eCLIP10.97□□□□□ -0.65
HDLBP-228ENST00000459788 MAPTP10636 758 aaKnown RBP10.97□□□□□ -0.65
HDLBP-228ENST00000459788 PAX3P23760 479 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 CDC25AP30304 524 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 HOXA9P31269 272 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 RPL9P32969 192 aaKnown RBP10.97□□□□□ -0.65
HDLBP-228ENST00000459788 ZNF131P52739 623 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 NCKAP1LP55160 1127 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 POU5F1Q01860 360 aaKnown RBP10.97□□□□□ -0.65
HDLBP-228ENST00000459788 MTMR3Q13615 1198 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 ZNF568Q3ZCX4 644 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 TAS1R3Q7RTX0 852 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 TAS1R1Q7RTX1 841 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 TMEM161BQ8NDZ6 487 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 FAM122AQ96E09 287 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 ACAP3Q96P50 834 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 KIFC3Q9BVG8 833 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 CDT1Q9H211 546 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 PLEKHA5Q9HAU0 1116 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 MAN1C1Q9NR34 630 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 KLK14Q9P0G3 267 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 CNTN3Q9P232 1028 aa10.97□□□□□ -0.65
HDLBP-228ENST00000459788 ZFP37Q9Y6Q3 630 aaPredicted RBP10.97□□□□□ -0.65
HDLBP-228ENST00000459788 SMIM28A0A1B0GU29 152 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 SPDYE4A6NLX3 237 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 C2CD4DB7Z1M9 353 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 ABLIM1O14639 778 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 PIGRP01833 764 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 SSBP05455 408 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDLBP-228ENST00000459788 FGFR3P22607 806 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 MAPK8IP2Q13387 824 aaPredicted RBP10.96□□□□□ -0.65
HDLBP-228ENST00000459788 SF3A1Q15459 793 aaKnown RBP10.96□□□□□ -0.65
HDLBP-228ENST00000459788 UPP1Q16831 310 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 UVSSAQ2YD98 709 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 TMC5Q6UXY8 1006 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 HFE2Q6ZVN8 426 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 RIN2Q8WYP3 895 aaPredicted RBP10.96□□□□□ -0.65
HDLBP-228ENST00000459788 SNX27Q96L92 541 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 TCHPQ9BT92 498 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 ST6GALNAC4Q9H4F1 302 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 ZSCAN16Q9H4T2 348 aaPredicted RBP10.96□□□□□ -0.65
HDLBP-228ENST00000459788 PARVGQ9HBI0 331 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 WDR6Q9NNW5 1121 aaKnown RBP10.96□□□□□ -0.65
HDLBP-228ENST00000459788 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.96□□□□□ -0.65
HDLBP-228ENST00000459788 IGSF9Q9P2J2 1179 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 STK17AQ9UEE5 414 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 MAFFQ9ULX9 164 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 GDAQ9Y2T3 454 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 BACE2Q9Y5Z0 518 aa10.96□□□□□ -0.65
HDLBP-228ENST00000459788 CCDC195A0A1B0GUA6 201 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 CASTOR2A6NHX0 329 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 C2CD2LO14523 706 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 SYN3O14994 580 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 SLC16A4O15374 487 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 CLDN3O15551 220 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 TGM5O43548 720 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 ZMYND10O75800 440 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 KIF4AO95239 1232 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 CLTAP09496 248 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 LIG1P18858 919 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 MCL1Q07820 350 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 RAB33AQ14088 237 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 NOLC1Q14978 699 aaKnown RBP eCLIP10.95□□□□□ -0.66
HDLBP-228ENST00000459788 PSMD5Q16401 504 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 ARSHQ5FYA8 562 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 RTP2Q5QGT7 225 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 FAM171A1Q5VUB5 890 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 ANKS3Q6ZW76 656 aa10.95□□□□□ -0.66
HDLBP-228ENST00000459788 SUGP1Q8IWZ8 645 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms