RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 P4HBP07237 508 aaKnown RBP20.74■□□□□ 0.91
SNX27-204ENST00000458013 GNAT1P11488 350 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 TJAP1Q5JTD0 557 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 CDKL3Q8IVW4 592 aaPredicted RBP20.74■□□□□ 0.91
SNX27-204ENST00000458013 NSUN6Q8TEA1 469 aaKnown RBP20.74■□□□□ 0.91
SNX27-204ENST00000458013 RIN2Q8WYP3 895 aaPredicted RBP20.74■□□□□ 0.91
SNX27-204ENST00000458013 ARHGEF1Q92888 912 aaKnown RBP20.74■□□□□ 0.91
SNX27-204ENST00000458013 HOXC10Q9NYD6 342 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 MROH7-TTC4A0A0A0MT08 1334 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 KIF2BQ8N4N8 673 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 USP6P35125 1406 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 AVPR1AP37288 418 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 TPI1P60174 286 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 MTMR2Q13614 643 aa20.74■□□□□ 0.91
SNX27-204ENST00000458013 SCARF1Q14162 830 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 TTLL4Q14679 1199 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 ELP3Q9H9T3 547 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 HSPA9P38646 679 aaKnown RBP20.73■□□□□ 0.91
SNX27-204ENST00000458013 PRAMEF18Q5VWM3 479 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 SRBD1Q8N5C6 995 aaKnown RBP20.73■□□□□ 0.91
SNX27-204ENST00000458013 MCPH1Q8NEM0 835 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 TEX12Q9BXU0 123 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 TRABDQ9H4I3 376 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 AKAP10O43572 662 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 FMR1Q06787 632 aaKnown RBP eCLIP20.73■□□□□ 0.91
SNX27-204ENST00000458013 HIF1AQ16665 826 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 SARM1Q6SZW1 724 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 DDX56Q9NY93 547 aaKnown RBP20.73■□□□□ 0.91
SNX27-204ENST00000458013 SCP2P22307 547 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 PDAP1Q13442 181 aaKnown RBP20.73■□□□□ 0.91
SNX27-204ENST00000458013 LAYNQ6UX15 382 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 BHMTQ93088 406 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 TBXAS1P24557 533 aaPredicted RBP20.73■□□□□ 0.91
SNX27-204ENST00000458013 IFNEQ86WN2 208 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 PROM2Q8N271 834 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 NLRP1Q9C000 1473 aa20.73■□□□□ 0.91
SNX27-204ENST00000458013 F8W8V4 182 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 KDM1AO60341 852 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 CENPAP49450 140 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 KRT72Q14CN4 511 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 SYTL3Q4VX76 610 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 EPC2Q52LR7 807 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 DGKHQ86XP1 1220 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 UBA3Q8TBC4 463 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 ZC3H4Q9UPT8 1303 aaKnown RBP20.72■□□□□ 0.91
SNX27-204ENST00000458013 F5H6K3 240 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 KLRC3Q07444 240 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 INPP5DQ92835 1189 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 APRTP07741 180 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 NNMTP40261 264 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 CARSP49589 748 aaKnown RBP20.72■□□□□ 0.91
SNX27-204ENST00000458013 BTKQ06187 659 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 GJB7Q6PEY0 223 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 MYO1DO94832 1006 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 PLIN5Q00G26 463 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 PWP1Q13610 501 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 SPATA2LQ8IUW3 424 aaPredicted RBP20.72■□□□□ 0.91
SNX27-204ENST00000458013 ACAP3Q96P50 834 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 SUPT3HB4E1H0 165 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 PCYT1AP49585 367 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 CAV1Q03135 178 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 TBL3Q12788 808 aaKnown RBP20.72■□□□□ 0.91
SNX27-204ENST00000458013 OR6J1Q8NGC5 347 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 MAGEB5Q9BZ81 275 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 ASCC2Q9H1I8 757 aaPredicted RBP20.72■□□□□ 0.91
SNX27-204ENST00000458013 EML4Q9HC35 981 aaKnown RBP20.72■□□□□ 0.91
SNX27-204ENST00000458013 TMEM161AQ9NX61 479 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 PIM2Q9P1W9 311 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 STAP1Q9ULZ2 295 aa20.72■□□□□ 0.91
SNX27-204ENST00000458013 WBP4O75554 376 aaKnown RBP20.71■□□□□ 0.91
SNX27-204ENST00000458013 ARHGEF6Q15052 776 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 CYP4A22Q5TCH4 519 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 OLFML2BQ68BL8 750 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 PLA2G4FQ68DD2 849 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 KCNF1Q9H3M0 494 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 GOLPH3Q9H4A6 298 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 KLC4Q9NSK0 619 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 TBC1D22BQ9NU19 505 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 FAM49BQ9NUQ9 324 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 GRID2IPA4D2P6 1211 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 CPA2P48052 419 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 RRM2BQ7LG56 351 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 HIC1Q14526 733 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 TRIM60Q495X7 471 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 ZC2HC1CQ53FD0 456 aaPredicted RBP20.71■□□□□ 0.91
SNX27-204ENST00000458013 ANO5Q75V66 913 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 SNX31Q8N9S9 440 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 PI4K2AQ9BTU6 479 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 AGPAT5Q9NUQ2 364 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 HMGCS2P54868 508 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 ORC1Q13415 861 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 KIAA2013Q8IYS2 634 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 TJP2Q9UDY2 1190 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 HMOX2P30519 316 aa20.71■□□□□ 0.91
SNX27-204ENST00000458013 KRT7P08729 469 aa20.7■□□□□ 0.9
SNX27-204ENST00000458013 UBTFL6P0CB48 400 aaPredicted RBP20.7■□□□□ 0.9
SNX27-204ENST00000458013 DEUP1Q05D60 604 aa20.7■□□□□ 0.9
SNX27-204ENST00000458013 PKN3Q6P5Z2 889 aa20.7■□□□□ 0.9
SNX27-204ENST00000458013 GIMAP8Q8ND71 665 aaPredicted RBP20.7■□□□□ 0.9
SNX27-204ENST00000458013 STOML1Q9UBI4 398 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms