RNA–Protein interactions for RNA: ENST00000456711.5

COMMD3-204, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-204ENST00000456711 GHRP10912 638 aa7.34□□□□□ -1.23
COMMD3-204ENST00000456711 HOXC8P31273 242 aa7.34□□□□□ -1.23
COMMD3-204ENST00000456711 NOVA1P51513 510 aaKnown RBP7.34□□□□□ -1.23
COMMD3-204ENST00000456711 STAT2P52630 851 aa7.34□□□□□ -1.23
COMMD3-204ENST00000456711 PLCB3Q01970 1234 aa7.34□□□□□ -1.23
COMMD3-204ENST00000456711 NAA30Q147X3 362 aaPredicted RBP7.34□□□□□ -1.23
COMMD3-204ENST00000456711 PTPN14Q15678 1187 aa7.34□□□□□ -1.23
COMMD3-204ENST00000456711 SPOUT1Q5T280 376 aaKnown RBP7.34□□□□□ -1.23
COMMD3-204ENST00000456711 C16orf86Q6ZW13 317 aa7.34□□□□□ -1.23
COMMD3-204ENST00000456711 MRPS27Q92552 414 aaKnown RBP7.34□□□□□ -1.23
COMMD3-204ENST00000456711 ZNF512BQ96KM6 892 aaPredicted RBP7.34□□□□□ -1.23
COMMD3-204ENST00000456711 OSBPL6Q9BZF3 934 aa7.34□□□□□ -1.23
COMMD3-204ENST00000456711 SLC2A4RGQ9NR83 387 aa7.34□□□□□ -1.23
COMMD3-204ENST00000456711 PUF60Q9UHX1 559 aaKnown RBP7.34□□□□□ -1.23
COMMD3-204ENST00000456711 NEUROG3Q9Y4Z2 214 aa7.34□□□□□ -1.23
COMMD3-204ENST00000456711 HECTD1Q9ULT8 2610 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 FRMPD2Q68DX3 1309 aaPredicted RBP7.33□□□□□ -1.24
COMMD3-204ENST00000456711 LOXHD1Q8IVV2 1947 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 FNDC1Q4ZHG4 1894 aaPredicted RBP7.33□□□□□ -1.24
COMMD3-204ENST00000456711 TMEM232C9JQI7 657 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 GIPC1O14908 333 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 PRMT3O60678 531 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 CLASP2O75122 1294 aaKnown RBP7.33□□□□□ -1.24
COMMD3-204ENST00000456711 C1QL1O75973 258 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 KRT38O76015 456 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 CHRNA1P02708 482 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 CAPNS1P04632 268 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 STAG3L1P0CL83 205 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 MAOBP27338 520 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 GATMP50440 423 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 TROAPQ12815 778 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 SIM2Q14190 667 aaPredicted RBP7.33□□□□□ -1.24
COMMD3-204ENST00000456711 LPIN1Q14693 890 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 SF3A2Q15428 464 aaKnown RBP7.33□□□□□ -1.24
COMMD3-204ENST00000456711 IFI16Q16666 785 aaKnown RBP7.33□□□□□ -1.24
COMMD3-204ENST00000456711 C12orf60Q5U649 245 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 TMC5Q6UXY8 1006 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 TMC7Q7Z402 723 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.33□□□□□ -1.24
COMMD3-204ENST00000456711 GPR149Q86SP6 731 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 ZNF605Q86T29 641 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 FAM160B2Q86V87 743 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 MRPL43Q8N983 215 aaKnown RBP7.33□□□□□ -1.24
COMMD3-204ENST00000456711 COLGALT1Q8NBJ5 622 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 PPTC7Q8NI37 304 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 FEZF2Q8TBJ5 459 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 ASAP3Q8TDY4 903 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 CHURC1Q8WUH1 139 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 LINC01599Q8WXQ3 324 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 DDX23Q9BUQ8 820 aaKnown RBP7.33□□□□□ -1.24
COMMD3-204ENST00000456711 CLIP2Q9UDT6 1046 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 CCPG1Q9ULG6 757 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 CTNND2Q9UQB3 1225 aa7.33□□□□□ -1.24
COMMD3-204ENST00000456711 MTF2Q9Y483 593 aaPredicted RBP7.33□□□□□ -1.24
COMMD3-204ENST00000456711 BAZ2AQ9UIF9 1905 aaKnown RBP7.33□□□□□ -1.24
COMMD3-204ENST00000456711 C2orf16Q68DN1 1984 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 CYP2D7A0A087X1C5 515 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 PTPDC1A2A3K4 754 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 C2orf71A6NGG8 1288 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 B4DLN1 442 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 J3QKU1 62 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 N4BP1O75113 896 aaKnown RBP7.32□□□□□ -1.24
COMMD3-204ENST00000456711 ECEL1O95672 775 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 TDGF1P13385 188 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 CALML3P27482 149 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 MRPL12P52815 198 aaKnown RBP7.32□□□□□ -1.24
COMMD3-204ENST00000456711 SRSF1Q07955 248 aaKnown RBP eCLIP7.32□□□□□ -1.24
COMMD3-204ENST00000456711 SMC1AQ14683 1233 aaKnown RBP7.32□□□□□ -1.24
COMMD3-204ENST00000456711 UBXN2BQ14CS0 331 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 OCLNQ16625 522 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 LETM2Q2VYF4 491 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 RTN4RL1Q86UN2 441 aaPredicted RBP7.32□□□□□ -1.24
COMMD3-204ENST00000456711 GMCL1P1Q8NEA9 526 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 DNERQ8NFT8 737 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 FAM200AQ8TCP9 573 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 MKL1Q969V6 931 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 HRASLS5Q96KN8 279 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 KLHL5Q96PQ7 755 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 RNPEPQ9H4A4 650 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 MSRB2Q9Y3D2 182 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 KIAA1217Q5T5P2 1943 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 FREM2Q5SZK8 3169 aa7.32□□□□□ -1.24
COMMD3-204ENST00000456711 MYO18BQ8IUG5 2567 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 NFIBO00712 420 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 PPFIA4O75335 1185 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 NTRK1P04629 796 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 ICAM1P05362 532 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 ZNF806P0C7X5 589 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 SMIM10L2AP0DMW4 78 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 SMIM10L2BP0DMW5 78 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 KRTAP10-2P60368 255 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 SNAP25P60880 206 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 ATP8B2P98198 1209 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 IKQ13123 557 aaPredicted RBP7.31□□□□□ -1.24
COMMD3-204ENST00000456711 ZBTB41Q5SVQ8 909 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 SLFN13Q68D06 897 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 SLC30A10Q6XR72 485 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 SEPT14Q6ZU15 432 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 ATCAYQ86WG3 371 aa7.31□□□□□ -1.24
COMMD3-204ENST00000456711 AMOTL1Q8IY63 956 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms