RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 TMED2Q15363 201 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 DDB1Q16531 1140 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 ZNF449Q6P9G9 518 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 ZNF720Q7Z2F6 126 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 KSR1Q8IVT5 923 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 FAM178BQ8IXR5 827 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 SYCP3Q8IZU3 236 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 RDH13Q8NBN7 331 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 LMO3Q8TAP4 145 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 BTBD6Q96KE9 485 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 UBN1Q9NPG3 1134 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 UVRAGQ9P2Y5 699 aa14.63□□□□□ -0.07
PTPRE-204ENST00000455661 H0Y3Z8 333 aa14.62□□□□□ -0.07
PTPRE-204ENST00000455661 MEIS2O14770 477 aa14.62□□□□□ -0.07
PTPRE-204ENST00000455661 CYP1A2P05177 515 aa14.62□□□□□ -0.07
PTPRE-204ENST00000455661 CETPP11597 493 aa14.62□□□□□ -0.07
PTPRE-204ENST00000455661 WDR4P57081 412 aaKnown RBP14.62□□□□□ -0.07
PTPRE-204ENST00000455661 RNASELQ05823 741 aaKnown RBP14.62□□□□□ -0.07
PTPRE-204ENST00000455661 TRIP13Q15645 432 aaPredicted RBP14.62□□□□□ -0.07
PTPRE-204ENST00000455661 SPDYAQ5MJ70 313 aa14.62□□□□□ -0.07
PTPRE-204ENST00000455661 CEP128Q6ZU80 1094 aa14.62□□□□□ -0.07
PTPRE-204ENST00000455661 ZNF653Q96CK0 615 aa14.62□□□□□ -0.07
PTPRE-204ENST00000455661 CDCA7Q9BWT1 371 aaPredicted RBP14.62□□□□□ -0.07
PTPRE-204ENST00000455661 CD209Q9NNX6 404 aa14.62□□□□□ -0.07
PTPRE-204ENST00000455661 RGL1Q9NZL6 768 aa14.62□□□□□ -0.07
PTPRE-204ENST00000455661 STOML1Q9UBI4 398 aa14.62□□□□□ -0.07
PTPRE-204ENST00000455661 SPDYE5A6NIY4 337 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 MSH4O15457 936 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 RAD21O60216 631 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 HNRNPCL1O60812 293 aaKnown RBP14.61□□□□□ -0.07
PTPRE-204ENST00000455661 ASMTLO95671 621 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 IVDP26440 423 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 EPHB2P29323 1055 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 ZNF76P36508 570 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 RAB27AP51159 221 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 MOGSQ13724 837 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 LLGL1Q15334 1064 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 ZRSR2Q15696 482 aaKnown RBP14.61□□□□□ -0.07
PTPRE-204ENST00000455661 C1orf186Q6ZWK4 172 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 ARHGEF19Q8IW93 802 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 ATL2Q8NHH9 583 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 CFAP61Q8NHU2 1237 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 LRRC8CQ8TDW0 803 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 CRYGNQ8WXF5 182 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 SLC7A6OSQ96CW6 309 aaPredicted RBP14.61□□□□□ -0.07
PTPRE-204ENST00000455661 PCDHB18PQ96TA0 734 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 GTF3C4Q9UKN8 822 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 USP20Q9Y2K6 914 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 P4HA2O15460 535 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 UPP2O95045 317 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 SGPL1O95470 568 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 FOSP01100 380 aaPredicted RBP14.61□□□□□ -0.07
PTPRE-204ENST00000455661 GM2AP17900 193 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 BRD2P25440 801 aaKnown RBP14.61□□□□□ -0.07
PTPRE-204ENST00000455661 MARK3P27448 753 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 PTPN4P29074 926 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 TRAF1Q13077 416 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 CCDC6Q16204 474 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 GRIPAP1Q4V328 841 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 IRGCQ6NXR0 463 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 RGS9BPQ6ZS82 235 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 TPH2Q8IWU9 490 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 PSPC1Q8WXF1 523 aaKnown RBP14.61□□□□□ -0.07
PTPRE-204ENST00000455661 LENG9Q96B70 501 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 SYT15Q9BQS2 421 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 TUFT1Q9NNX1 390 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 CHST7Q9NS84 486 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 VAV3Q9UKW4 847 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 EMSYQ7Z589 1322 aa14.61□□□□□ -0.07
PTPRE-204ENST00000455661 FAM86B1E9PN63 330 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 TRAFD1O14545 582 aaPredicted RBP14.6□□□□□ -0.07
PTPRE-204ENST00000455661 NVLO15381 856 aaKnown RBP14.6□□□□□ -0.07
PTPRE-204ENST00000455661 SPAG7O75391 227 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 FAM86B2P0C5J1 330 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 CHRNB2P17787 502 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 MFSD14BQ5SR56 506 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 C15orf52Q6ZUT6 534 aaKnown RBP14.6□□□□□ -0.07
PTPRE-204ENST00000455661 ZNF365Q70YC5 407 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 CPNE8Q86YQ8 564 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 SLC9A9Q8IVB4 645 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 GALNT15Q8N3T1 639 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 TTC8Q8TAM2 541 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 GPR101Q96P66 508 aaPredicted RBP14.6□□□□□ -0.07
PTPRE-204ENST00000455661 SERPINB13Q9UIV8 391 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 SMG5Q9UPR3 1016 aaKnown RBP14.6□□□□□ -0.07
PTPRE-204ENST00000455661 ASB3Q9Y575 518 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 GAKO14976 1311 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 EDF1O60869 148 aaKnown RBP14.6□□□□□ -0.07
PTPRE-204ENST00000455661 T-ENOLP0DO92 83 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 POLD1P28340 1107 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 SREBF1P36956 1147 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 VHLP40337 213 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 GCLCP48506 637 aaPredicted RBP14.6□□□□□ -0.07
PTPRE-204ENST00000455661 VPS41P49754 854 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 GRAPQ13588 217 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 MYBPC2Q14324 1141 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 ODR4Q5SWX8 454 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 RELL1Q8IUW5 271 aa14.6□□□□□ -0.07
PTPRE-204ENST00000455661 GRAPLQ8TC17 118 aaPredicted RBP14.6□□□□□ -0.07
PTPRE-204ENST00000455661 ZFAND2BQ8WV99 257 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms