RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PLA2G5P39877 138 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 GPC3P51654 580 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 NPEPPSP55786 919 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 EVCP57679 992 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 SETQ01105 290 aaPredicted RBP5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 PRKCEQ02156 737 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 SCRN1Q12765 414 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 PSMD2Q13200 908 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 SMAD4Q13485 552 aaKnown RBP5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 NPY5RQ15761 445 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 INF2Q27J81 1249 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 TSNAXIP1Q2TAA8 658 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 NAALADL2Q58DX5 795 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 CLLU1OSQ5K130 101 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 ODR4Q5SWX8 454 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 TTC39BQ5VTQ0 682 aaPredicted RBP5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 PLPP4Q5VZY2 271 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 KANK3Q6NY19 840 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 LLGL2Q6P1M3 1020 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 ECHDC2Q86YB7 292 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 TEX2Q8IWB9 1127 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 BLIDQ8IZY5 108 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 LINC01465Q8N7H1 131 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 EFHBQ8N7U6 833 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 CCDC148Q8NFR7 591 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 BICD2Q8TD16 824 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 LPPQ93052 612 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 CCDC74AQ96AQ1 378 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 ZNF274Q96GC6 653 aaPredicted RBP5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 MSLNLQ96KJ4 702 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 RPGRIP1Q96KN7 1286 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 SCLT1Q96NL6 688 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 CEP89Q96ST8 783 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 MAP7D2Q96T17 732 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 RIT2Q99578 217 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 TEKT3Q9BXF9 490 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 SLKQ9H2G2 1235 aaPredicted RBP5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 SH3GLB2Q9NR46 395 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 TLR9Q9NR96 1032 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 LATS2Q9NRM7 1088 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 C1orf112Q9NSG2 853 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 PDRG1Q9NUG6 133 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 TMEM161AQ9NX61 479 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 PRKAG3Q9UGI9 489 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 CDH22Q9UJ99 828 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 ATXN7L1Q9ULK2 861 aaPredicted RBP5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 CEP131Q9UPN4 1083 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 FAM50BQ9Y247 325 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 CYP46A1Q9Y6A2 500 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 MUC6Q6W4X9 2439 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 TRIP11Q15643 1979 aa5.27□□□□□ -1.57
GTF3C3-208ENST00000455546 ZNF318Q5VUA4 2279 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 CYP3A7-CYP3A51PA0A087WV96 503 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 A0A087WZ62 844 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 MEIS3P2A8K0S8 358 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 FSCN2O14926 492 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 SLC37A4O43826 429 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 DEXIO95424 95 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 EYA4O95677 639 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 RECKO95980 971 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 WEE2P0C1S8 567 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 SRGAP2CP0DJJ0 459 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 DARSP14868 501 aaKnown RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 ATF7P17544 494 aaPredicted RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 CES1P23141 567 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 CYP3A7P24462 503 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 SFNP31947 248 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 CA8P35219 290 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 TECP42680 631 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 JAK3P52333 1124 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 COASYQ13057 564 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 TARBP2Q15633 366 aaKnown RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 LETM2Q2VYF4 491 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 Q4G0T1 1027 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 EARS2Q5JPH6 523 aaKnown RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 PLA2G4FQ68DD2 849 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 MCTP2Q6DN12 878 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 ALG1LQ6GMV1 187 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 KCNT2Q6UVM3 1135 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 XKR5Q6UX68 686 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 PIK3AP1Q6ZUJ8 805 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 HFE2Q6ZVN8 426 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 SV2AQ7L0J3 742 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 ALYREFQ86V81 257 aaKnown RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 RHPN2Q8IUC4 686 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 ABI1Q8IZP0 508 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 SMRP1Q8NCR6 262 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 ETNPPLQ8TBG4 499 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 FEZF2Q8TBJ5 459 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 AUTS2Q8WXX7 1259 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 MRPS27Q92552 414 aaKnown RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 PPP2R3CQ969Q6 453 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 FAM167AQ96KS9 214 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 NSUN5Q96P11 429 aaKnown RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 TCF25Q9BQ70 676 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 FDXACB1Q9BRP7 624 aaPredicted RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 TMEM117Q9H0C3 514 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 S1PR5Q9H228 398 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 ELAC1Q9H777 363 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms