RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 BCL6BQ8N143 479 aaPredicted RBP6.54□□□□□ -1.36
CDH19-202ENST00000454642 MYRIPQ8NFW9 859 aa6.54□□□□□ -1.36
CDH19-202ENST00000454642 NSUN6Q8TEA1 469 aaKnown RBP6.54□□□□□ -1.36
CDH19-202ENST00000454642 WDR92Q96MX6 357 aa6.54□□□□□ -1.36
CDH19-202ENST00000454642 CLIC6Q96NY7 704 aa6.54□□□□□ -1.36
CDH19-202ENST00000454642 GORASP1Q9BQQ3 440 aa6.54□□□□□ -1.36
CDH19-202ENST00000454642 CRB3Q9BUF7 120 aa6.54□□□□□ -1.36
CDH19-202ENST00000454642 KCND1Q9NSA2 647 aa6.54□□□□□ -1.36
CDH19-202ENST00000454642 LMBRD1Q9NUN5 540 aa6.54□□□□□ -1.36
CDH19-202ENST00000454642 ABCF2Q9UG63 623 aa6.54□□□□□ -1.36
CDH19-202ENST00000454642 IQGAP1P46940 1657 aa6.54□□□□□ -1.36
CDH19-202ENST00000454642 RASA4BC9J798 803 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 NPHP1O15259 732 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 RASA4O43374 803 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 PIP5K1CO60331 668 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 MYF5P13349 255 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 HALP42357 657 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 SLC6A9P48067 706 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 PER3P56645 1201 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 PLS1Q14651 629 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 POLD3Q15054 466 aaPredicted RBP6.53□□□□□ -1.36
CDH19-202ENST00000454642 UBE3CQ15386 1083 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 KHDC1Q4VXA5 237 aaKnown RBP6.53□□□□□ -1.36
CDH19-202ENST00000454642 HEATR3Q7Z4Q2 680 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 LIX1LQ8IVB5 337 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 KRT78Q8N1N4 520 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 OR2C3Q8N628 320 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 C3orf20Q8ND61 904 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 FBXO18Q8NFZ0 1043 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 TMX3Q96JJ7 454 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 PDCD2LQ9BRP1 358 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 UBA5Q9GZZ9 404 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 LDAHQ9H6V9 325 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 CPA4Q9UI42 421 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 CDC23Q9UJX2 597 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 PNMA2Q9UL42 364 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 ALKQ9UM73 1620 aa6.53□□□□□ -1.36
CDH19-202ENST00000454642 A0A0G2JNJ9 132 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 A0A1W2PR48 441 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 H0Y858 1186 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 SLC16A6O15403 523 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 SH3BP5O60239 455 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 KITP10721 976 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 ABCB4P21439 1286 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 TNFSF4P23510 183 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 ECHS1P30084 290 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 KCNQ1P51787 676 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 HK3P52790 923 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 GPSM2P81274 684 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 CDC42EP1Q00587 391 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 TARDBPQ13148 414 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDH19-202ENST00000454642 RAPGEF1Q13905 1077 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 FGL2Q14314 439 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 LCE3BQ5TA77 95 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 IRF2BP1Q8IU81 584 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 HOXB13Q92826 284 aaPredicted RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 KIAA1191Q96A73 305 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 DMRTA2Q96SC8 542 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 UHRF1Q96T88 793 aaPredicted RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 VPS11Q9H270 941 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 TLR9Q9NR96 1032 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 SIRT5Q9NXA8 310 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 Q9UFV3 132 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 SIK3Q9Y2K2 1263 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 LAS1LQ9Y4W2 734 aaKnown RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 MORC2Q9Y6X9 1032 aaPredicted RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 EHBP1L1Q8N3D4 1523 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 TNRQ92752 1358 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 USP19O94966 1318 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 EIF2AK4Q9P2K8 1649 aaKnown RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 NCK2O43639 380 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 ENDOD1O94919 500 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 LTA4HP09960 611 aaKnown RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 PPM1FP49593 454 aaPredicted RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 SMAD4Q13485 552 aaKnown RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 CIAPIN1Q6FI81 312 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 MYLK4Q86YV6 388 aaPredicted RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 MSL3Q8N5Y2 521 aaKnown RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 CELF5Q8N6W0 485 aaKnown RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 PIK3C3Q8NEB9 887 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 PPP1R14CQ8TAE6 165 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 DEPTORQ8TB45 409 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 PPM1EQ8WY54 764 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 PHKBQ93100 1093 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 MTFMTQ96DP5 389 aaKnown RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 PAWRQ96IZ0 340 aaKnown RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 SAMD11Q96NU1 681 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 LRRC27Q9C0I9 530 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 CERS4Q9HA82 394 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 DCP1AQ9NPI6 582 aaPredicted RBP6.52□□□□□ -1.37
CDH19-202ENST00000454642 GPRC5BQ9NZH0 403 aa6.52□□□□□ -1.37
CDH19-202ENST00000454642 UGGT1Q9NYU2 1555 aa6.51□□□□□ -1.37
CDH19-202ENST00000454642 NPHP4O75161 1426 aaPredicted RBP6.51□□□□□ -1.37
CDH19-202ENST00000454642 A0A1W2PPL8 197 aa6.51□□□□□ -1.37
CDH19-202ENST00000454642 FSBPO95073 299 aa6.51□□□□□ -1.37
CDH19-202ENST00000454642 GAAP10253 952 aa6.51□□□□□ -1.37
CDH19-202ENST00000454642 HSPA1LP34931 641 aa6.51□□□□□ -1.37
CDH19-202ENST00000454642 NKX6-1P78426 367 aaPredicted RBP6.51□□□□□ -1.37
CDH19-202ENST00000454642 TARBP2Q15633 366 aaKnown RBP6.51□□□□□ -1.37
CDH19-202ENST00000454642 KCNMB1Q16558 191 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms