RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 VIL1P09327 827 aaKnown RBP10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 TMEM253P0C7T8 217 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 SLC1A1P43005 524 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 TAP1Q03518 808 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GPS1Q13098 491 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PPP2R3BQ9Y5P8 575 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 ALG6Q9Y672 507 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 TARSL2A2RTX5 802 aaKnown RBP10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GSTA1P08263 222 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GSTA2P09210 222 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 RARRES1P49788 294 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GTF2A1P52655 376 aaPredicted RBP10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CAV1Q03135 178 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 SEZ6Q53EL9 994 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GNASQ5JWF2 1037 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 NXNQ6DKJ4 435 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 EP400NLQ6ZTU2 488 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CFAP36Q96G28 342 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 NIF3L1Q9GZT8 377 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 SPATC1LQ9H0A9 340 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 AGO4Q9HCK5 861 aaKnown RBP10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 SMARCAL1Q9NZC9 954 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PDE4DIPQ5VU43 2346 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 SLC4A1P02730 911 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GUCY2CP25092 1073 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 DSG3P32926 999 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 DHX34Q14147 1143 aaKnown RBP10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 OTOP1Q7RTM1 612 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 KCNK18Q7Z418 384 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 NOA1Q8NC60 698 aaKnown RBP10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 LACRTQ9GZZ8 138 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 EFCC1Q9HA90 598 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 WDR35Q9P2L0 1181 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 FNDC3AQ9Y2H6 1198 aaKnown RBP10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PEAK1Q9H792 1746 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CREB3O43889 395 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CLCN3P51790 818 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 DGKDQ16760 1214 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 KATNAL1Q9BW62 490 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 MROH8Q9H579 483 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 DONSONQ9NYP3 566 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 TLK1Q9UKI8 766 aa10.66□□□□□ -0.7
CSGALNACT1-203ENST00000454498 WDR91A4D1P6 747 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PDGFRAP16234 1089 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 RGS7P49802 495 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PMS2P54278 862 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PSMD6Q15008 389 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 E2F4Q16254 413 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PRPF31Q8WWY3 499 aaKnown RBP10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 ZFYVE28Q9HCC9 887 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 DDX56Q9NY93 547 aaKnown RBP10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PRKAG2Q9UGJ0 569 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 DUSP10Q9Y6W6 482 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 EML1O00423 815 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PIK3R2O00459 728 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 OGTO15294 1046 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 ATMINO43313 823 aaPredicted RBP10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 SH3BP5O60239 455 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 KRT37O76014 449 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 SLITRK3O94933 977 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 KRT14P02533 472 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 COMTP21964 271 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PCK1P35558 622 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 HERVK_113P62684 666 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 SEPT6Q14141 434 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 PGM5Q15124 567 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 NUGGCQ68CJ6 796 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 FBXO16Q8IX29 292 aaPredicted RBP10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 GDAP1Q8TB36 358 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 RAET1EQ8TD07 263 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 TMEM117Q9H0C3 514 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 RBM12Q9NTZ6 932 aaKnown RBP10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 KLHL11Q9NVR0 708 aa10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 CHORDC1Q9UHD1 332 aaPredicted RBP10.65□□□□□ -0.7
CSGALNACT1-203ENST00000454498 FAM237AA0A1B0GTK4 181 aa10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 TTI1O43156 1089 aa10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 CLTAP09496 248 aa10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 NAMPTP43490 491 aa10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 TERF2Q15554 542 aa10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 HP1BP3Q5SSJ5 553 aaPredicted RBP10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 ZC3H18Q86VM9 953 aaKnown RBP10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 TRIM42Q8IWZ5 723 aa10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 SRRM1Q8IYB3 904 aaKnown RBP10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 RSRC1Q96IZ7 334 aaKnown RBP10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 FBXL5Q9UKA1 691 aa10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 ATRNO75882 1429 aa10.65□□□□□ -0.71
CSGALNACT1-203ENST00000454498 RASA4BC9J798 803 aa10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 RASA4O43374 803 aa10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 IL18RAPO95256 599 aa10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 PDGFRBP09619 1106 aa10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 GTF2A2P52657 109 aa10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 MAGOHP61326 146 aaKnown RBP10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 NME3Q13232 169 aa10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 THOC5Q13769 683 aaKnown RBP10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 TMEM119Q4V9L6 283 aa10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 HEATR6Q6AI08 1181 aaKnown RBP10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 TRAPPC11Q7Z392 1133 aa10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 SH3RF1Q7Z6J0 888 aa10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 RYBPQ8N488 228 aaPredicted RBP10.64□□□□□ -0.71
CSGALNACT1-203ENST00000454498 MCUQ8NE86 351 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms