RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TMEM62Q0P6H9 643 aa17.15■□□□□ 0.34
SNX17-204ENST00000453453 PTGISQ16647 500 aa17.15■□□□□ 0.34
SNX17-204ENST00000453453 FAM187BQ17R55 369 aa17.15■□□□□ 0.34
SNX17-204ENST00000453453 KIZQ2M2Z5 673 aa17.15■□□□□ 0.34
SNX17-204ENST00000453453 EIF3CQ99613 913 aaKnown RBP17.15■□□□□ 0.34
SNX17-204ENST00000453453 CBWD1Q9BRT8 395 aa17.15■□□□□ 0.34
SNX17-204ENST00000453453 TARS2Q9BW92 718 aaKnown RBP17.15■□□□□ 0.34
SNX17-204ENST00000453453 OGDHLQ9ULD0 1010 aa17.15■□□□□ 0.34
SNX17-204ENST00000453453 GINS2Q9Y248 185 aa17.15■□□□□ 0.34
SNX17-204ENST00000453453 TISP43B9A030 160 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 MAPK13O15264 365 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 RNF40O75150 1001 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 AKAP3O75969 853 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 ERLIN2O94905 339 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 RHOXF2BP0C7M4 288 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 KRT13P13646 458 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 ITIH3Q06033 890 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 PCBP1Q15365 356 aaKnown RBP eCLIP17.14■□□□□ 0.334e-22■■■■■ 62.2
SNX17-204ENST00000453453 FKBP15Q5T1M5 1219 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 SLC39A4Q6P5W5 647 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 GBP6Q6ZN66 633 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 SERINC5Q86VE9 423 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 SUGP1Q8IWZ8 645 aaKnown RBP17.14■□□□□ 0.33
SNX17-204ENST00000453453 ZNF333Q96JL9 665 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 RHOXF2Q9BQY4 288 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 FAM204AQ9H8W3 233 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 KIAA1586Q9HCI6 787 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 ANKFY1Q9P2R3 1169 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 HPCAL4Q9UM19 191 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.14■□□□□ 0.33
SNX17-204ENST00000453453 STYXL1Q9Y6J8 313 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 GRIN2DO15399 1336 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 A0A087WUV0 522 aaPredicted RBP17.14■□□□□ 0.33
SNX17-204ENST00000453453 LRRIQ3A6PVS8 624 aaPredicted RBP17.14■□□□□ 0.33
SNX17-204ENST00000453453 LGALS16A8MUM7 142 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 CLDN3O15551 220 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 GPR32O75388 356 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 TOM1L1O75674 476 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 LDHAP00338 332 aaKnown RBP17.14■□□□□ 0.33
SNX17-204ENST00000453453 CASP4P49662 377 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 KRT83P78385 493 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 VWA3BQ502W6 1294 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 DNAJC21Q5F1R6 531 aaKnown RBP17.14■□□□□ 0.33
SNX17-204ENST00000453453 ATF7IP2Q5U623 682 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 TRIM59Q8IWR1 403 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 GPD1LQ8N335 351 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 ACRBPQ8NEB7 543 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 COG1Q8WTW3 980 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 ARMC5Q96C12 935 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 IQCDQ96DY2 449 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 ACO2Q99798 780 aaKnown RBP17.14■□□□□ 0.33
SNX17-204ENST00000453453 TCHPQ9BT92 498 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 MSTO1Q9BUK6 570 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 ADAMTS10Q9H324 1103 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 MINDY3Q9H8M7 445 aa17.14■□□□□ 0.33
SNX17-204ENST00000453453 EPN1Q9Y6I3 576 aaPredicted RBP17.14■□□□□ 0.33
SNX17-204ENST00000453453 ATXN2Q99700 1313 aaKnown RBP17.13■□□□□ 0.33
SNX17-204ENST00000453453 CNTNAP2Q9UHC6 1331 aa17.13■□□□□ 0.33
SNX17-204ENST00000453453 N4BP1O75113 896 aaKnown RBP17.13■□□□□ 0.33
SNX17-204ENST00000453453 NDUFA10O95299 355 aa17.13■□□□□ 0.33
SNX17-204ENST00000453453 ADSSP30520 456 aa17.13■□□□□ 0.33
SNX17-204ENST00000453453 CRYBB1P53674 252 aaPredicted RBP17.13■□□□□ 0.33
SNX17-204ENST00000453453 MRPS6P82932 125 aaKnown RBP17.13■□□□□ 0.33
SNX17-204ENST00000453453 UBXN1Q04323 297 aa17.13■□□□□ 0.33
SNX17-204ENST00000453453 PTK7Q13308 1070 aa17.13■□□□□ 0.33
SNX17-204ENST00000453453 CCDC70Q6NSX1 233 aa17.13■□□□□ 0.33
SNX17-204ENST00000453453 TSHZ1Q6ZSZ6 1077 aa17.13■□□□□ 0.33
SNX17-204ENST00000453453 INTS8Q75QN2 995 aaKnown RBP17.13■□□□□ 0.33
SNX17-204ENST00000453453 APBB1IPQ7Z5R6 666 aaPredicted RBP17.13■□□□□ 0.33
SNX17-204ENST00000453453 USP37Q86T82 979 aa17.13■□□□□ 0.33
SNX17-204ENST00000453453 NOA1Q8NC60 698 aaKnown RBP17.13■□□□□ 0.33
SNX17-204ENST00000453453 DNAJC7Q99615 494 aa17.13■□□□□ 0.33
SNX17-204ENST00000453453 AGO2Q9UKV8 859 aaKnown RBP17.13■□□□□ 0.33
SNX17-204ENST00000453453 EXTL3O43909 919 aa17.12■□□□□ 0.33
SNX17-204ENST00000453453 SYF2O95926 243 aaKnown RBP17.12■□□□□ 0.33
SNX17-204ENST00000453453 TFRCP02786 760 aaKnown RBP17.12■□□□□ 0.33
SNX17-204ENST00000453453 DARSP14868 501 aaKnown RBP17.12■□□□□ 0.33
SNX17-204ENST00000453453 SNRNP35Q16560 246 aaKnown RBP17.12■□□□□ 0.33
SNX17-204ENST00000453453 TCERG1LQ5VWI1 586 aa17.12■□□□□ 0.33
SNX17-204ENST00000453453 MPZL3Q6UWV2 235 aa17.12■□□□□ 0.33
SNX17-204ENST00000453453 CATSPER4Q7RTX7 472 aa17.12■□□□□ 0.33
SNX17-204ENST00000453453 ZNF572Q7Z3I7 529 aaPredicted RBP17.12■□□□□ 0.33
SNX17-204ENST00000453453 RPAINQ86UA6 219 aa17.12■□□□□ 0.33
SNX17-204ENST00000453453 OR8K1Q8NGG5 319 aa17.12■□□□□ 0.33
SNX17-204ENST00000453453 SAAL1Q96ER3 474 aa17.12■□□□□ 0.33
SNX17-204ENST00000453453 OSMRQ99650 979 aa17.12■□□□□ 0.33
SNX17-204ENST00000453453 CELF4Q9BZC1 486 aaKnown RBP17.12■□□□□ 0.33
SNX17-204ENST00000453453 NDST4Q9H3R1 872 aa17.12■□□□□ 0.33
SNX17-204ENST00000453453 TRPV2Q9Y5S1 764 aa17.12■□□□□ 0.33
SNX17-204ENST00000453453 SAR1BQ9Y6B6 198 aa17.12■□□□□ 0.33
SNX17-204ENST00000453453 A0A0B4J269 797 aa17.11■□□□□ 0.33
SNX17-204ENST00000453453 ARVCFO00192 962 aa17.11■□□□□ 0.33
SNX17-204ENST00000453453 EDN1P05305 212 aa17.11■□□□□ 0.33
SNX17-204ENST00000453453 EIF4BP23588 611 aaKnown RBP17.11■□□□□ 0.33
SNX17-204ENST00000453453 KRT9P35527 623 aa17.11■□□□□ 0.33
SNX17-204ENST00000453453 ZNF568Q3ZCX4 644 aa17.11■□□□□ 0.33
SNX17-204ENST00000453453 DCAF17Q5H9S7 520 aaPredicted RBP17.11■□□□□ 0.33
SNX17-204ENST00000453453 SLC43A3Q8NBI5 491 aa17.11■□□□□ 0.33
SNX17-204ENST00000453453 RDH13Q8NBN7 331 aa17.11■□□□□ 0.33
SNX17-204ENST00000453453 CPLX3Q8WVH0 158 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms