RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 WDR24Q96S15 920 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 MTG1Q9BT17 334 aaPredicted RBP15.4■□□□□ 0.06
USP39-207ENST00000450066 TSGA10Q9BZW7 698 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 FAM49AQ9H0Q0 323 aaPredicted RBP15.4■□□□□ 0.06
USP39-207ENST00000450066 LUC7LQ9NQ29 371 aaKnown RBP15.4■□□□□ 0.06
USP39-207ENST00000450066 ADAMTS1Q9UHI8 967 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 C17orf102A2RUQ5 167 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 RCCD1A6NED2 376 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 FOXN3O00409 490 aaPredicted RBP15.4■□□□□ 0.06
USP39-207ENST00000450066 GPR32O75388 356 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 PNMA6AP0CW24 399 aaPredicted RBP15.4■□□□□ 0.06
USP39-207ENST00000450066 MCF2P10911 925 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 ARF4P18085 180 aaPredicted RBP15.4■□□□□ 0.06
USP39-207ENST00000450066 MAGEA1P43355 309 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 KIZQ2M2Z5 673 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 TDRD10Q5VZ19 366 aaKnown RBP15.4■□□□□ 0.06
USP39-207ENST00000450066 LMBRD2Q68DH5 695 aaPredicted RBP15.4■□□□□ 0.06
USP39-207ENST00000450066 RUFY4Q6ZNE9 571 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 VPS36Q86VN1 386 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 WDR49Q8IV35 697 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 PPM1KQ8N3J5 372 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 PPP1R13LQ8WUF5 828 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 FAM81BQ96LP2 452 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.4■□□□□ 0.06
USP39-207ENST00000450066 GCOM2Q9BZD3 368 aaPredicted RBP15.4■□□□□ 0.06
USP39-207ENST00000450066 LACRTQ9GZZ8 138 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 PDZD7Q9H5P4 517 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 HDAC6Q9UBN7 1215 aa15.4■□□□□ 0.06
USP39-207ENST00000450066 A0A087X0T9 212 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 FANCGO15287 622 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 TREHO43280 583 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 TSPAN1O60635 241 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 ERLIN2O94905 339 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 PGK1P00558 417 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 GNRH1P01148 92 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 FAM228BP0C875 321 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 PRKAR2AP13861 404 aaKnown RBP15.39■□□□□ 0.05
USP39-207ENST00000450066 ELNP15502 786 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 YY1P25490 414 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 POU5F1Q01860 360 aaKnown RBP15.39■□□□□ 0.05
USP39-207ENST00000450066 PCBP1Q15365 356 aaKnown RBP eCLIP15.39■□□□□ 0.05
USP39-207ENST00000450066 THNSL1Q8IYQ7 743 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 ZNF710Q8N1W2 664 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 CD99L2Q8TCZ2 262 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 HELQQ8TDG4 1101 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 TRIM10Q9UDY6 481 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 GUCA1BQ9UMX6 200 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 A0A1B0GUA9 196 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 GPR25O00155 361 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 PJA2O43164 708 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 HLA-DRAP01903 254 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 CASQ1P31415 396 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 GCNT1Q02742 428 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 BIRC3Q13489 604 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 BMS1Q14692 1282 aaKnown RBP15.39■□□□□ 0.05
USP39-207ENST00000450066 KYAT1Q16773 422 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 ZNF569Q5MCW4 686 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 C10orf76Q5T2E6 689 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 ENOSF1Q7L5Y1 443 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 CDR2LQ86X02 465 aaPredicted RBP15.39■□□□□ 0.05
USP39-207ENST00000450066 OR5B17Q8NGF7 314 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 KREMEN1Q96MU8 473 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 XPNPEP3Q9NQH7 507 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 TFR2Q9UP52 801 aa15.39■□□□□ 0.05
USP39-207ENST00000450066 ADAMTS4O75173 837 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 VNN1O95497 513 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 HMGCRP04035 888 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 CLTAP09496 248 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 CCND3P30281 292 aaPredicted RBP15.38■□□□□ 0.05
USP39-207ENST00000450066 TMEM62Q0P6H9 643 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 WDR44Q5JSH3 913 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 FAM71AQ8IYT1 594 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 NME8Q8N427 588 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 SHC3Q92529 594 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 CPB2Q96IY4 423 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 FAM84AQ96KN4 292 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 C1orf112Q9NSG2 853 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 DNAH12Q6ZR08 3092 aa15.38■□□□□ 0.05
USP39-207ENST00000450066 RIOK3O14730 519 aaKnown RBP15.37■□□□□ 0.05
USP39-207ENST00000450066 B4GALT4O60513 344 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 IL18RAPO95256 599 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 PIK3CAP42336 1068 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 ZNF200P98182 395 aaPredicted RBP15.37■□□□□ 0.05
USP39-207ENST00000450066 DUOXA2Q1HG44 320 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 MAP3K21Q5TCX8 1036 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 CXCL17Q6UXB2 119 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 CEP120Q8N960 986 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 DNAJB3Q8WWF6 145 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 KAT5Q92993 513 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 SYT11Q9BT88 431 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 PI4K2AQ9BTU6 479 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 RPF1Q9H9Y2 349 aaKnown RBP15.37■□□□□ 0.05
USP39-207ENST00000450066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.37■□□□□ 0.059e-9■■■■■ 111.8
USP39-207ENST00000450066 NAGPAQ9UK23 515 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 STAG3L1P0CL83 205 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 DARSP14868 501 aaKnown RBP15.37■□□□□ 0.05
USP39-207ENST00000450066 OSTNP61366 133 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 NCBP1Q09161 790 aaKnown RBP15.37■□□□□ 0.05
USP39-207ENST00000450066 NAB2Q15742 525 aa15.37■□□□□ 0.05
USP39-207ENST00000450066 TAF2Q6P1X5 1199 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms